RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PARM1Q6UWI2 310 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 OR52E1Q8NGJ3 308 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 TAAR2Q9P1P5 351 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 INSL5Q9Y5Q6 135 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 CA1P00915 261 aaPredicted RBP9.24□□□□□ -0.93
COL12A1-207ENST00000483888 EDDM3BP56851 147 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 EXT1Q16394 746 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 TMEM255AQ5JRV8 349 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 SLC17A5Q9NRA2 495 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 IL17CQ9P0M4 197 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 YIPF1Q9Y548 306 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 NPIPB9F8W1W9 429 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 CTDSPLO15194 276 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 GJB5O95377 273 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 TMEM151BQ8IW70 566 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 P4HTMQ9NXG6 502 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 HMGN4O00479 90 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 CTAG2O75638 210 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 RECKO95980 971 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 CISD2Q8N5K1 135 aaKnown RBP9.24□□□□□ -0.93
COL12A1-207ENST00000483888 NCOR1P1Q9H4R4 102 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 STARD5Q9NSY2 213 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 ZDHHC8Q9ULC8 765 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 MYLKQ15746 1914 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 PLPP2O43688 288 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 KLRB1Q12918 225 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 HERPUD1Q15011 391 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 CLDND1Q9NY35 253 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 APBB3O95704 486 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 NHLRC3Q5JS37 347 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 SLC25A34Q6PIV7 304 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 UBTD2Q8WUN7 234 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 HIST1H2BAQ96A08 127 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 SMDT1Q9H4I9 107 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 MTCL1Q9Y4B5 1905 aaKnown RBP9.24□□□□□ -0.93
COL12A1-207ENST00000483888 MED1Q15648 1581 aaPredicted RBP9.24□□□□□ -0.93
COL12A1-207ENST00000483888 TRAV36DV7A0A075B6V5 113 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 WNT11O96014 354 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 RELQ04864 619 aaPredicted RBP9.24□□□□□ -0.93
COL12A1-207ENST00000483888 LDLRAD2Q5SZI1 272 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 MRPL54Q6P161 138 aaKnown RBP9.24□□□□□ -0.93
COL12A1-207ENST00000483888 TMEM116Q8NCL8 245 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 OR10G4Q8NGN3 311 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 OR10G9Q8NGN4 311 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 OR10G7Q8NGN6 311 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 OR13G1Q8NGZ3 307 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 TMPRSS13Q9BYE2 586 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 COA3Q9Y2R0 106 aaPredicted RBP9.24□□□□□ -0.93
COL12A1-207ENST00000483888 P04436 131 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 SLC38A11Q08AI6 406 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 R3HDM4Q96D70 268 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 SHDQ96IW2 340 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 GNB4Q9HAV0 340 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 ICE1Q9Y2F5 2266 aa9.24□□□□□ -0.93
COL12A1-207ENST00000483888 LRRC37A3O60309 1634 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 ZNF217O75362 1048 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 CKS1BP61024 79 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TAS1R1Q7RTX1 841 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 OR51E1Q8TCB6 317 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 MENTQ9BUN1 341 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 ASCL3Q9NQ33 180 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TRBV11-1A0A0K0K1C0 115 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 HSPB2A8KAH6 182 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 SLC17A2O00624 439 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 MMP9P14780 707 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 RCC1P18754 421 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-207ENST00000483888 HSPB2Q16082 182 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 DEFB110Q30KQ9 67 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TMEM207Q6UWW9 146 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 MARCH3Q86UD3 253 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 ATOH7Q8N100 152 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 KCNK15Q9H427 330 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 SERPINE3A8MV23 424 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 ZNF660Q6AZW8 331 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-207ENST00000483888 RNF2Q99496 336 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 BARHL1Q9BZE3 327 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 C20orf141Q9NUB4 165 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 SERINC4A6NH21 518 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 LMX1BO60663 402 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 POU3F2P20265 443 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-207ENST00000483888 CLDN17P56750 224 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TMEM183AQ8IXX5 376 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 WNT6Q9Y6F9 365 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 RGPD1P0DJD0 1748 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TMEM265A0A087WTH1 108 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 CDC14CA4D256 554 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TRGC1P0CF51 173 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TRMT12Q53H54 448 aaKnown RBP9.23□□□□□ -0.93
COL12A1-207ENST00000483888 LSRQ86X29 649 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TMEM140Q9NV12 185 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TIMM9Q9Y5J7 89 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 SLC35G1Q2M3R5 365 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 KREMEN2Q8NCW0 462 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TM4SF18Q96CE8 201 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 RAB40CQ96S21 281 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 MOSPD3O75425 235 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 FCRL6Q6DN72 434 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 TRAT1Q6PIZ9 186 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 ST6GALNAC3Q8NDV1 305 aa9.23□□□□□ -0.93
COL12A1-207ENST00000483888 SPACA9Q96E40 222 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms