RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 FAM90A20PA6NIJ5 464 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 NME4O00746 187 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 NPFFO15130 113 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 XRCC2O43543 280 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 NDUFB3O43676 98 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 TIPRLO75663 272 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 GADD45GO95257 159 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 LHBP01229 141 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 TMEM225BP0DP42 221 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 NCK1P16333 377 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 HOXA5P20719 270 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 NAA10P41227 235 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-207ENST00000483407 GSK3BP49841 420 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 SPIBQ01892 262 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 HERPUD1Q15011 391 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 SEC23BQ15437 767 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 SNCBQ16143 134 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 SNAI3Q3KNW1 292 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 LRRC10Q5BKY1 277 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 GLYATL3Q5SZD4 288 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 DGAT2L7PQ6IED9 249 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 CCDC144NLQ6NUI1 221 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 C11orf88Q6PI97 169 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 ZNF826PQ6ZT77 177 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 DPY19L4Q7Z388 723 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 FTMTQ8N4E7 242 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 PROKR2Q8NFJ6 384 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 OR52L1Q8NGH7 329 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 OR56B2PQ8NGI1 322 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 OR2T4Q8NH00 348 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 OR2AE1Q8NHA4 323 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 LRRC29Q8WV35 223 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 MCUR1Q96AQ8 359 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 C12orf43Q96C57 262 aaKnown RBP4.81□□□□□ -1.64
CSDE1-207ENST00000483407 CCL13Q99616 98 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 ALG8Q9BVK2 526 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 FN3KQ9H479 309 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 SP140LQ9H930 580 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 VIPAS39Q9H9C1 493 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 EFCAB1Q9HAE3 211 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 SIRT7Q9NRC8 400 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 LIN7CQ9NUP9 197 aaKnown RBP4.81□□□□□ -1.64
CSDE1-207ENST00000483407 FGFR1OP2Q9NVK5 253 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 ZNRD1Q9P1U0 126 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 N6AMT1Q9Y5N5 214 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 MEIOCA2RUB1 952 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 OR6C68A6NDL8 312 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 NKX6-3A6NJ46 265 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 ANXA2P2A6NMY6 339 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 ZNF878C9JN71 531 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 RNASEK-C17orf49H0YIS7 233 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 PSMD9O00233 223 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 PIN1P1O15428 100 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 CCDC22O60826 627 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 DIRAS1O95057 198 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 APOC1P02654 83 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 OPN1MWP04001 364 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 IL6RP08887 468 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-207ENST00000483407 SPARCP09486 303 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 OPN1MW2P0DN77 364 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 OPN1MW3P0DN78 364 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 EGR2P11161 476 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-207ENST00000483407 SLC2A1P11166 492 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 COX4I1P13073 169 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 CFL1P23528 166 aaKnown RBP4.8□□□□□ -1.64
CSDE1-207ENST00000483407 GABRA5P31644 462 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 OTX1P32242 354 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-207ENST00000483407 PYCR1P32322 319 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 SLC15A1P46059 708 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 NUDT2P50583 147 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 PRKXP51817 358 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.8□□□□□ -1.64
CSDE1-207ENST00000483407 ACSM1Q08AH1 577 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 PCK2Q16822 640 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 WDR38Q5JTN6 314 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 NCR3LG1Q68D85 454 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 GLYATQ6IB77 296 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 SLC35E4Q6ICL7 350 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 RPL13AP3Q6NVV1 102 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 HACD2Q6Y1H2 254 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 DCXRQ7Z4W1 244 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 CPLX4Q7Z7G2 160 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 ZDHHC21Q8IVQ6 265 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 LY6G5BQ8NDX9 201 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 OR1M1Q8NGA1 313 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 OR4C13Q8NGP0 309 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 GNPDA2Q8TDQ7 276 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 H1FXQ92522 213 aaKnown RBP4.8□□□□□ -1.64
CSDE1-207ENST00000483407 C7orf34Q96L11 122 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 FUZQ9BT04 418 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 DCTN5Q9BTE1 182 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 FAM234AQ9H0X4 552 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 SEMA6AQ9H2E6 1030 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 PPA2Q9H2U2 334 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 RAB18Q9NP72 206 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 CENPMQ9NSP4 180 aa4.8□□□□□ -1.64
CSDE1-207ENST00000483407 DCAF13Q9NV06 445 aaKnown RBP4.8□□□□□ -1.64
CSDE1-207ENST00000483407 ARGLU1Q9NWB6 273 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-207ENST00000483407 MRPL22Q9NWU5 206 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms