RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 RNF144BQ7Z419 303 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 SPERTQ8NA61 448 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 PLPP7Q8NBV4 271 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 OR10AC1Q8NH08 325 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 BORCS5Q969J3 196 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 TECTBQ96PL2 329 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 DUX5Q96PT3 197 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 MICU1Q9BPX6 476 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 ZNF649Q9BS31 505 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 RTL8AQ9BWD3 113 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 OR51I2Q9H344 312 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 FAM118AQ9NWS6 357 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 OR5V1Q9UGF6 321 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 ENOPH1Q9UHY7 261 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 GNG8Q9UK08 70 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 BLOC1S6Q9UL45 172 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 NOP16Q9Y3C1 178 aaKnown RBP9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 GMPPBQ9Y5P6 360 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 MPC1Q9Y5U8 109 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 AUP1Q9Y679 476 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 V9GYS6 101 aa9.46□□□□□ -0.9
RAPGEF1-207ENST00000481260 PPIAL4CA0A0B4J2A2 164 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 ACOD1A6NK06 481 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 DVL1O14640 695 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 WBP4O75554 376 aaKnown RBP9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 FSTL3O95633 263 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 KRT8P05787 483 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 OR2T7P0C7T2 308 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 ATP6V1B1P15313 513 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 PCMT1P22061 227 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 MAP2K3P46734 347 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 MTNR1AP48039 350 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 FGF12P61328 243 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 IL5RAQ01344 420 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 RIPPLY1Q0D2K3 151 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 OCLNQ16625 522 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 CEACAM21Q3KPI0 293 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 FAM76BQ5HYJ3 339 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 PLCXD3Q63HM9 321 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 GPR141Q7Z602 305 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 OR2T27Q8NH04 317 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 RHOXF1Q8NHV9 184 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 NPRL2Q8WTW4 380 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 RAB40AQ8WXH6 277 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 C1orf147Q96MC9 270 aaPredicted RBP9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 NUDT16L1Q9BRJ7 211 aaKnown RBP9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 C9orf16Q9BUW7 83 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 ISG20L2Q9H9L3 353 aaKnown RBP9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 ELL3Q9HB65 397 aaPredicted RBP9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 CLN8Q9UBY8 286 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 PAIP2BQ9ULR5 123 aaKnown RBP9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 ORC6Q9Y5N6 252 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 SNX5Q9Y5X3 404 aa9.45□□□□□ -0.9
RAPGEF1-207ENST00000481260 IGKV1-27A0A075B6S5 117 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 TRAV38-1A0A0B4J264 116 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 KIR2DS1A0A191URI9 304 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 LOC100130705A0A1B0GUX0 176 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 ANXA2P2A6NMY6 339 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 SRRM5B3KS81 715 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 E9PI62 339 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 F8VVB4 439 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 F8VWA3 439 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 TMPRSS2O15393 492 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 TCF21O43680 179 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 DHRS3O75911 302 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 HNRNPCP07910 306 aaKnown RBP eCLIP9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 DBTP11182 482 aaKnown RBP9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 CCL1P22362 96 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 MYF6P23409 242 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 ATP6V1E1P36543 226 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 CEBPDP49716 269 aaPredicted RBP9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 CBX3Q13185 183 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 IKZF1Q13422 519 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 DGUOKQ16854 277 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 TUSC1Q2TAM9 212 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 SLC25A30Q5SVS4 291 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 RUSC1-AS1Q66K80 236 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 TMEM42Q69YG0 159 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 STUMQ69YW2 141 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 HAGHLQ6PII5 290 aaPredicted RBP9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 BRD3OSQ6XYD6 125 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 Q6ZSR3 168 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 THAP5Q7Z6K1 395 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 LHFPL3Q86UP9 236 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 ANGPTL5Q86XS5 388 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 SIGLECL1Q8N7X8 197 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 ZDHHC22Q8N966 263 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 NANPQ8TBE9 248 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 TRMT10AQ8TBZ6 339 aaKnown RBP9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 TRUB1Q8WWH5 349 aaKnown RBP9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 TMEM158Q8WZ71 300 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 ST8SIA4Q92187 359 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 GAFA1Q96PS6 74 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 TBX15Q96SF7 602 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 MNTQ99583 582 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 RHBDL2Q9NX52 303 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 FRRS1LQ9P0K9 344 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 ENPP5Q9UJA9 477 aa9.44□□□□□ -0.9
RAPGEF1-207ENST00000481260 EXOGQ9Y2C4 368 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms