RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 ANGPTL6Q8NI99 470 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 AQP3Q92482 292 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 RORBQ92753 470 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 UBE2FQ969M7 185 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 DMRTB1Q96MA1 342 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 ZNF48Q96MX3 618 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-209ENST00000480900 WDFY2Q96P53 400 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 PCGF1Q9BSM1 259 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 SIRPDQ9H106 197 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 SNTG1Q9NSN8 517 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 NLKQ9UBE8 527 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 DUX4Q9UBX2 424 aa14.07□□□□□ -0.16
HSPG2-209ENST00000480900 DNAJC9-AS1A6NH13 148 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 ENTPD6O75354 484 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 SFTPBP07988 381 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 GLRA1P23415 457 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 PRTN3P24158 256 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 COMPP49747 757 aaPredicted RBP14.06□□□□□ -0.16
HSPG2-209ENST00000480900 ISL1P61371 349 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 ACTC1P68032 377 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 ACTA1P68133 377 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 IL13RA1P78552 427 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 ZNF85Q03923 595 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 DMRTC1Q5HYR2 192 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 HAGHLQ6PII5 290 aaPredicted RBP14.06□□□□□ -0.16
HSPG2-209ENST00000480900 C12orf54Q6X4T0 127 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 ZNF788Q6ZQV5 615 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 FAM220AQ7Z4H9 259 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 PQLC1Q8N2U9 271 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 FGFRL1Q8N441 504 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 CCDC54Q8NEL0 328 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 MED30Q96HR3 178 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 GAFA1Q96PS6 74 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 TBX15Q96SF7 602 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 MBOAT4Q96T53 435 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 DSCAML1Q8TD84 2053 aa14.06□□□□□ -0.16
HSPG2-209ENST00000480900 A0A1B0GVI7 797 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 TMEM89A2RUT3 159 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 SNTNA6NMZ2 147 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 OR2AT4A6NND4 320 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 J3QT63 122 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 ACAA1P09110 424 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-209ENST00000480900 BAMBIQ13145 260 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 IKZF1Q13422 519 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 PDCD1Q15116 288 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 ZNF573Q86YE8 665 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 LY6G5BQ8NDX9 201 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 C8orf46Q8TAG6 207 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 GCDHQ92947 438 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-209ENST00000480900 TMIGD2Q96BF3 282 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 RNFT2Q96EX2 444 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 C1orf147Q96MC9 270 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-209ENST00000480900 CNTD2Q9H8S5 307 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 GPR173Q9NS66 373 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 RASL12Q9NYN1 266 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 GNG8Q9UK08 70 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 GMPPBQ9Y5P6 360 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 KPTNQ9Y664 436 aa14.05□□□□□ -0.16
HSPG2-209ENST00000480900 PQLC2LA1A4F0 135 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 CLDN34H7C241 214 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 J3QRE1 110 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 SIGLEC5O15389 551 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 SYT7O43581 403 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 SELLP14151 372 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 GABRB1P18505 474 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 CAV3P56539 151 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 ARF6P62330 175 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 ODF4Q2M2E3 257 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 CDONQ4KMG0 1287 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 TP53I3Q53FA7 332 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 BRD3OSQ6XYD6 125 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 ZBTB49Q6ZSB9 765 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 KCTD20Q7Z5Y7 419 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 POC1AQ8NBT0 407 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 SLC29A1Q99808 456 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 DCTN5Q9BTE1 182 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 PRDM13Q9H4Q3 707 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 PLEKHA1Q9HB21 404 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 ACOXLQ9NUZ1 547 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 SLC25A10Q9UBX3 287 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-209ENST00000480900 POLDIP2Q9Y2S7 368 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 PCDHGB1Q9Y5G3 927 aa14.04□□□□□ -0.16
HSPG2-209ENST00000480900 IGKV1D-17A0A075B6S4 117 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 ANKRD61A6NGH8 418 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 MPZL2O60487 215 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 NOS1APO75052 506 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-209ENST00000480900 UBCP0CG48 685 aaKnown RBP14.03□□□□□ -0.16
HSPG2-209ENST00000480900 PSG2P11465 335 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 HAAOP46952 286 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 SMIM21Q3B7S5 101 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 PRSS35Q8N3Z0 413 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 KIR3DL3Q8N743 410 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 RNF166Q96A37 237 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-209ENST00000480900 DUX5Q96PT3 197 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 ADI1Q9BV57 179 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 ZNF222Q9UK12 451 aa14.03□□□□□ -0.16
HSPG2-209ENST00000480900 SOX21Q9Y651 276 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-209ENST00000480900 CENPVL3A0A0U1RRI6 287 aa14.02□□□□□ -0.17
HSPG2-209ENST00000480900 LOC107986453A0A1B0GWG9 222 aa14.02□□□□□ -0.17
HSPG2-209ENST00000480900 DAPL1A0PJW8 107 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms