RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 TOR2AQ5JU69 321 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 S100A13Q99584 98 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 NMES1Q9C002 83 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 ARL6Q9H0F7 186 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 FOXJ2Q9P0K8 574 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 EDARQ9UNE0 448 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 A0A1W2PNU3 283 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-212ENST00000477970 A0A1W2PP11 408 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 PMS2P1A4D2B8 440 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 XRCC2O43543 280 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 PSG4Q00888 419 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 OC90Q02509 493 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-212ENST00000477970 HGFACQ04756 655 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 ZNF774Q6NX45 483 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 PLXDC2Q6UX71 529 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 C17orf107Q6ZR85 190 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 RTN4RL2Q86UN3 420 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 ROBO4Q8WZ75 1007 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 MRPS24Q96EL2 167 aaKnown RBP10.64□□□□□ -0.71
PTPRF-212ENST00000477970 METTL9Q9H1A3 318 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 SDK2Q58EX2 2172 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 hCG_38984A0A1B0GV85 526 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 CSN2P05814 226 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 COX5BP10606 129 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 DLSTP36957 453 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 PMELP40967 661 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 AANATQ16613 207 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 CCDC28AQ8IWP9 274 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 PXT1Q8NFP0 134 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 C1QTNF5Q9BXJ0 243 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 DECR2Q9NUI1 292 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 COMMD9Q9P000 198 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 TRBV6-7A0A0A0MS04 114 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 ZNF724A8MTY0 619 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 SFT2D2O95562 160 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 ZNF708P17019 499 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 ACKR3P25106 362 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 CYCSP99999 105 aaKnown RBP10.63□□□□□ -0.71
PTPRF-212ENST00000477970 CAMK2BQ13554 666 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 CEACAM16Q2WEN9 425 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 ABHD17BQ5VST6 288 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 RGS7BPQ6MZT1 257 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-212ENST00000477970 COLCA1Q6ZS62 124 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 OVCH2Q7RTZ1 564 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 ADAD2Q8NCV1 583 aaKnown RBP10.63□□□□□ -0.71
PTPRF-212ENST00000477970 OR5AP2Q8NGF4 316 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 DHRS9Q9BPW9 319 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 PARPBPQ9NWS1 579 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 MSRB2Q9Y3D2 182 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 TRAPPC6AO75865 159 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 MT-CO3P00414 261 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 AMY2BP19961 511 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 BLVRBP30043 206 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-212ENST00000477970 CLDN18P56856 261 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 AIMP2Q13155 320 aaKnown RBP10.63□□□□□ -0.71
PTPRF-212ENST00000477970 ZNF660Q6AZW8 331 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-212ENST00000477970 GALNTL5Q7Z4T8 443 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 ZNF546Q86UE3 836 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 MARCH1Q8TCQ1 289 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 TMEM230Q96A57 120 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 PHYHIPLQ96FC7 376 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 C5orf66Q9H5L9 145 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 RAB18Q9NP72 206 aa10.63□□□□□ -0.71
PTPRF-212ENST00000477970 PDGFAP04085 211 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 NMBP08949 121 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 B4GALT1P15291 398 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 DTYMKP23919 212 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 ARFRP1Q13795 201 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 AADACL3Q5VUY0 350 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 BCO1Q9HAY6 547 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 PTPRZ1P23471 2315 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-212ENST00000477970 WDR87Q6ZQQ6 2873 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 hCG_1807616A0A1W2PRN6 198 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 TMEM8BA6NDV4 472 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 FIGNL2A6NMB9 653 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 FARS2O95363 451 aaKnown RBP10.62□□□□□ -0.71
PTPRF-212ENST00000477970 LYL1P12980 280 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 SERPINA2P20848 420 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 HTR5AP47898 357 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 STARP49675 285 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 DCAF10Q5QP82 559 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 ACOT7LQ6ZUV0 252 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 EIF4E3Q8N5X7 224 aaKnown RBP10.62□□□□□ -0.71
PTPRF-212ENST00000477970 OR5M9Q8NGP3 310 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 OR13G1Q8NGZ3 307 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 ALKBH3Q96Q83 286 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-212ENST00000477970 REG4Q9BYZ8 158 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 SLC25A32Q9H2D1 315 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 DKK4Q9UBT3 224 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 CFAP54Q96N23 3096 aa10.62□□□□□ -0.71
PTPRF-212ENST00000477970 BCL2L11O43521 198 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 RBP2P50120 134 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 FUT6P51993 359 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 SNU13P55769 128 aaKnown RBP10.61□□□□□ -0.71
PTPRF-212ENST00000477970 BAMBIQ13145 260 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 SFRP5Q5T4F7 317 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 SKA3Q8IX90 412 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 EMG1Q92979 244 aaKnown RBP10.61□□□□□ -0.71
PTPRF-212ENST00000477970 RTBDNQ9BSG5 229 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-212ENST00000477970 PCDHB16Q9NRJ7 776 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms