RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 C9orf16Q9BUW7 83 aa10.13□□□□□ -0.79
PTPN7-210ENST00000477625 CNTD2Q9H8S5 307 aa10.13□□□□□ -0.79
PTPN7-210ENST00000477625 SNTG1Q9NSN8 517 aa10.13□□□□□ -0.79
PTPN7-210ENST00000477625 DUX4Q9UBX2 424 aa10.13□□□□□ -0.79
PTPN7-210ENST00000477625 RPUSD1Q9UJJ7 312 aaKnown RBP10.13□□□□□ -0.79
PTPN7-210ENST00000477625 TMEM89A2RUT3 159 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 SNTNA6NMZ2 147 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 OR2AT4A6NND4 320 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 MMP9P14780 707 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 PRTN3P24158 256 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 ARF6P62330 175 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 ACTG1P63261 375 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 ZNF85Q03923 595 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 BAMBIQ13145 260 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 IKZF1Q13422 519 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 ODF4Q2M2E3 257 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 LRRC10Q5BKY1 277 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 METTL11BQ5VVY1 283 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 HAGHLQ6PII5 290 aaPredicted RBP10.12□□□□□ -0.79
PTPN7-210ENST00000477625 C12orf54Q6X4T0 127 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 BRD3OSQ6XYD6 125 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 ZNF788Q6ZQV5 615 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 ZBTB49Q6ZSB9 765 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 ZNF573Q86YE8 665 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 PQLC1Q8N2U9 271 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 FGFRL1Q8N441 504 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 LY6G5BQ8NDX9 201 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 ANGPTL6Q8NI99 470 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 GCDHQ92947 438 aaPredicted RBP10.12□□□□□ -0.79
PTPN7-210ENST00000477625 TMIGD2Q96BF3 282 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 RNFT2Q96EX2 444 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 MED30Q96HR3 178 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 DMRTB1Q96MA1 342 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 TBX15Q96SF7 602 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 MBOAT4Q96T53 435 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 SLC29A1Q99808 456 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 ADI1Q9BV57 179 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 RASL12Q9NYN1 266 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 NLKQ9UBE8 527 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 GNG8Q9UK08 70 aa10.12□□□□□ -0.79
PTPN7-210ENST00000477625 SOX21Q9Y651 276 aaPredicted RBP10.12□□□□□ -0.79
PTPN7-210ENST00000477625 CENPVL3A0A0U1RRI6 287 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 A0A1B0GVI7 797 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 PQLC2LA1A4F0 135 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 A6NIN4 97 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 NKX6-3A6NJ46 265 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 J3QRE1 110 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 SYT7O43581 403 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 ACAA1P09110 424 aaPredicted RBP10.11□□□□□ -0.79
PTPN7-210ENST00000477625 HAAOP46952 286 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 COMPP49747 757 aaPredicted RBP10.11□□□□□ -0.79
PTPN7-210ENST00000477625 ISL1P61371 349 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 ACTC1P68032 377 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 ACTA1P68133 377 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 IL13RA1P78552 427 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 PDCD1Q15116 288 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 CDONQ4KMG0 1287 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 TP53I3Q53FA7 332 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 FAM220AQ7Z4H9 259 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 KCTD20Q7Z5Y7 419 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 PRSS35Q8N3Z0 413 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 C1orf147Q96MC9 270 aaPredicted RBP10.11□□□□□ -0.79
PTPN7-210ENST00000477625 GAFA1Q96PS6 74 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 SIRPDQ9H106 197 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 PRDM13Q9H4Q3 707 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 ZMAT3Q9HA38 289 aaKnown RBP10.11□□□□□ -0.79
PTPN7-210ENST00000477625 GPR173Q9NS66 373 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 PCDHGB1Q9Y5G3 927 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 GMPPBQ9Y5P6 360 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 KPTNQ9Y664 436 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 FBN3Q75N90 2809 aa10.11□□□□□ -0.79
PTPN7-210ENST00000477625 IGKV1D-17A0A075B6S4 117 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 DAPL1A0PJW8 107 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 ANKRD61A6NGH8 418 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 DNAJC9-AS1A6NH13 148 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 CLDN34H7C241 214 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 SIGLEC5O15389 551 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 MPZL2O60487 215 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 PSG2P11465 335 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 SELLP14151 372 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 GABRB1P18505 474 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 GABRA2P47869 451 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 DGUOKQ16854 277 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 POC1AQ8NBT0 407 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 CCDC54Q8NEL0 328 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 RHOXF1Q8NHV9 184 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 GATAD2BQ8WXI9 593 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 RNF166Q96A37 237 aaPredicted RBP10.1□□□□□ -0.79
PTPN7-210ENST00000477625 SLC25A28Q96A46 364 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 Q96MT0 163 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 DCTN5Q9BTE1 182 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 PLEKHA1Q9HB21 404 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 ACOXLQ9NUZ1 547 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 SLC25A10Q9UBX3 287 aaPredicted RBP10.1□□□□□ -0.79
PTPN7-210ENST00000477625 AASSQ9UDR5 926 aa10.1□□□□□ -0.79
PTPN7-210ENST00000477625 EXOGQ9Y2C4 368 aaKnown RBP10.1□□□□□ -0.79
PTPN7-210ENST00000477625 LOC100130705A0A1B0GUX0 176 aa10.09□□□□□ -0.79
PTPN7-210ENST00000477625 H3BSH0 61 aa10.09□□□□□ -0.79
PTPN7-210ENST00000477625 J3QT63 122 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms