RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TNFRSF11BO00300 401 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 NPFFO15130 113 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 TSPAN9O75954 239 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 CCNB2O95067 398 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 IGHV4-59P01825 116 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 H2BFMP0C1H6 154 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 PYCR1P32322 319 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 CX3CR1P49238 355 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 MXRA7P84157 204 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 EIF2B1Q14232 305 aaKnown RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 SNAI3Q3KNW1 292 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 ASPHD2Q6ICH7 369 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 KCTD8Q6ZWB6 473 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 TIGD4Q8IY51 512 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 OR4C13Q8NGP0 309 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 OR6K6Q8NGW6 343 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 OR2AE1Q8NHA4 323 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF671Q8TAW3 534 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 REEP6Q96HR9 211 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 PGAM5Q96HS1 289 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 PKP2Q99959 881 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 FUZQ9BT04 418 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 PAPOLGQ9BWT3 736 aaKnown RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 FN3KQ9H479 309 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 METTL8Q9H825 291 aaKnown RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 NIPAL2Q9H841 368 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 MRPL22Q9NWU5 206 aaKnown RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 IL20Q9NYY1 176 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 ZNRD1Q9P1U0 126 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 COMMD3-BMI1R4GMX3 469 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 V9GYQ6 96 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 SVEP1Q4LDE5 3571 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 TVP23AA6NH52 213 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 RNASEK-C17orf49H0YIS7 233 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 HOXB6P17509 224 aaKnown RBP5.96□□□□□ -1.46
BRCA1-214ENST00000477152 GABRA5P31644 462 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 RPS19P39019 145 aaKnown RBP5.96□□□□□ -1.46
BRCA1-214ENST00000477152 UBE2E1P51965 193 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 PROK1P58294 105 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 HERPUD1Q15011 391 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 PCK2Q16822 640 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 ATPAF1Q5TC12 328 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-214ENST00000477152 CGB2Q6NT52 195 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 SLC16A9Q7RTY1 509 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 PGAM4Q8N0Y7 254 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 SLC37A3Q8NCC5 494 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 LY6G5BQ8NDX9 201 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 OR2T6Q8NHC8 308 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 TEX47Q8TBZ9 253 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 INTS14Q96SY0 518 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 CCL13Q99616 98 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 DCTN5Q9BTE1 182 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 TSSK6Q9BXA6 273 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 MUC13Q9H3R2 512 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 RANBP3Q9H6Z4 567 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-214ENST00000477152 HAO2Q9NYQ3 351 aa5.96□□□□□ -1.46
BRCA1-214ENST00000477152 SLC25A10Q9UBX3 287 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-214ENST00000477152 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.96□□□□□ -1.46
BRCA1-214ENST00000477152 SOX21Q9Y651 276 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-214ENST00000477152 IGHV3OR15-7A0A075B7D8 119 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 ZNF816-ZNF321PA0A0X1KG74 233 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 MEIOCA2RUB1 952 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 H0YAE9 185 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 NDUFB7P17568 137 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 TGM4P49221 684 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 HMGA2P52926 109 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 CAV3P56539 151 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 FAM3AP98173 230 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 EMX1Q04741 257 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-214ENST00000477152 HNRNPA0Q13151 305 aaKnown RBP5.95□□□□□ -1.46
BRCA1-214ENST00000477152 AANATQ16613 207 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 WDR38Q5JTN6 314 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 WDR82Q6UXN9 313 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 Q6ZSV7 163 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 ZNF826PQ6ZT77 177 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 FAM57BQ71RH2 274 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 OR4S1Q8NGB4 309 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 OR51G2Q8NGK0 314 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 OR6N2Q8NGY6 317 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 C8orf46Q8TAG6 207 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 FAM81AQ8TBF8 368 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 WDR12Q9GZL7 423 aaKnown RBP5.95□□□□□ -1.46
BRCA1-214ENST00000477152 EGLN3Q9H6Z9 239 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 HEXA-AS1Q9H8Q6 139 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 REEP1Q9H902 201 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 RASL12Q9NYN1 266 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 ACOD1A6NK06 481 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 CDIPTO14735 213 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 XPNPEP2O43895 674 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 E2F6O75461 281 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 CST4P01036 141 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 SEMG1P04279 462 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 ATP6V1B1P15313 513 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 SPI1P17947 270 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 GLRA1P23415 457 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 HABP2Q14520 560 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-214ENST00000477152 FAM98BQ52LJ0 330 aaKnown RBP5.95□□□□□ -1.46
BRCA1-214ENST00000477152 Q6ZRM9 215 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 ERI1Q8IV48 349 aaKnown RBP5.95□□□□□ -1.46
BRCA1-214ENST00000477152 PDZD9Q8IXQ8 264 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms