RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 AKR7A2O43488 359 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 SYT7O43581 403 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 BPIFB3P59826 476 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 ZNF85Q03923 595 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 TP53I3Q53FA7 332 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 DMRTC1Q5HYR2 192 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 SHISA2Q6UWI4 295 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 PNLDC1Q8NA58 520 aaKnown RBP13.42□□□□□ -0.26
COL1A1-205ENST00000476387 OR14K1Q8NGZ2 314 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 ZNF671Q8TAW3 534 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 RORBQ92753 470 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 MRPL48Q96GC5 212 aaKnown RBP13.42□□□□□ -0.26
COL1A1-205ENST00000476387 DUX5Q96PT3 197 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 CCL13Q99616 98 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 OR51I2Q9H344 312 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 GPR173Q9NS66 373 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 ACOXLQ9NUZ1 547 aa13.42□□□□□ -0.26
COL1A1-205ENST00000476387 A0A1B0GTI1 187 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 LOC100130705A0A1B0GUX0 176 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 DLGAP1O14490 977 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 ECDO95905 644 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-205ENST00000476387 LIPFP07098 398 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 UBCP0CG48 685 aaKnown RBP13.41□□□□□ -0.26
COL1A1-205ENST00000476387 CCL1P22362 96 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 GLRA1P23415 457 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 FGF12P61328 243 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 ZNF91Q05481 1191 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 SLC9A3R2Q15599 337 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 C11orf91Q3C1V1 193 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 STUMQ69YW2 141 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 HAGHLQ6PII5 290 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-205ENST00000476387 KCTD20Q7Z5Y7 419 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 ENTHD1Q8IYW4 607 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 ACBD7Q8N6N7 88 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 FAM216BQ8N7L0 139 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 CCDC54Q8NEL0 328 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 ZNF555Q8NEP9 628 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 SEH1LQ96EE3 360 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 RDH12Q96NR8 316 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 MYCBPQ99417 103 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-205ENST00000476387 DNTTIP1Q9H147 329 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 WDR13Q9H1Z4 485 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 RASSF4Q9H2L5 321 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 SNTG1Q9NSN8 517 aa13.41□□□□□ -0.26
COL1A1-205ENST00000476387 SMPD3Q9NY59 655 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-205ENST00000476387 IGHV3OR16-10A0A075B7F0 116 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 H3BSH0 61 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 SLC16A6O15403 523 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 NDUFB3O43676 98 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 RHBDL1O75783 438 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 ISL1P61371 349 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 ACTA2P62736 377 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 ACTG2P63267 376 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 IL13RA1P78552 427 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 IKZF1Q13422 519 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 CDONQ4KMG0 1287 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 LRRC10Q5BKY1 277 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 GPR157Q5UAW9 335 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 TMEM42Q69YG0 159 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 BTN2A1Q7KYR7 527 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 ZNF573Q86YE8 665 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 OR5T2Q8NGG2 359 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 AQP3Q92482 292 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 TMIGD2Q96BF3 282 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 FAM118AQ9NWS6 357 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 NLKQ9UBE8 527 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 AASSQ9UDR5 926 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 PKD1L1Q8TDX9 2849 aa13.4□□□□□ -0.26
COL1A1-205ENST00000476387 LOC107986453A0A1B0GWG9 222 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 ANKRD61A6NGH8 418 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 A6NIN4 97 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 ZNF879B4DU55 563 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 J3QT63 122 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 GATBO75879 557 aaKnown RBP13.39□□□□□ -0.27
COL1A1-205ENST00000476387 HTR1AP08908 422 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 DBTP11182 482 aaKnown RBP13.39□□□□□ -0.27
COL1A1-205ENST00000476387 GABRB1P18505 474 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 HAAOP46952 286 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 ELF3P78545 371 aaPredicted RBP13.39□□□□□ -0.27
COL1A1-205ENST00000476387 RCN1Q15293 331 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 PRR31Q5SQ13 230 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 METTL11BQ5VVY1 283 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 Q6ZSR3 168 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 PRSS35Q8N3Z0 413 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 RHOXF1Q8NHV9 184 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 LGALS12Q96DT0 336 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 PCGF1Q9BSM1 259 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 SLC7A11Q9UPY5 501 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 EXOGQ9Y2C4 368 aaKnown RBP13.39□□□□□ -0.27
COL1A1-205ENST00000476387 POLDIP2Q9Y2S7 368 aa13.39□□□□□ -0.27
COL1A1-205ENST00000476387 A0A1B0GW55 424 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 OR2AT4A6NND4 320 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 POM121CA8CG34 1229 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 J3QLW9 94 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 J3QRE1 110 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 GPR37O15354 613 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 TOX4O94842 621 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 FADS2O95864 444 aaKnown RBP13.38□□□□□ -0.27
COL1A1-205ENST00000476387 DUX4L2P0CJ85 424 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms