RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 NOL4LQ96MY1 436 aaPredicted RBP12.84□□□□□ -0.35
SAMM50-203ENST00000474323 SOX7Q9BT81 388 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 MRPL37Q9BZE1 423 aaKnown RBP12.84□□□□□ -0.35
SAMM50-203ENST00000474323 B3GALT5Q9Y2C3 310 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 A8MWP6 167 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 E5RGE8 158 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 TNFRSF10CO14798 259 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 CT45A8P0DMV1 189 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 CT45A9P0DMV2 189 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 HPGDP15428 266 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 HIST1H1DP16402 221 aaKnown RBP12.84□□□□□ -0.35
SAMM50-203ENST00000474323 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 KIR2DS3Q14952 304 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 USF2Q15853 346 aaPredicted RBP12.84□□□□□ -0.35
SAMM50-203ENST00000474323 CT45A2Q5DJT8 189 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 PDZD11Q5EBL8 140 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 OR2T2Q6IF00 324 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 COX15Q7KZN9 410 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 ABCA7Q8IZY2 2146 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 FLVCR1-AS1Q8TAF5 88 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 RERGQ96A58 199 aaPredicted RBP12.84□□□□□ -0.35
SAMM50-203ENST00000474323 RAB39BQ96DA2 213 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 LPAR5Q9H1C0 372 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 NSG2Q9Y328 171 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 MYO15AQ9UKN7 3530 aa12.84□□□□□ -0.35
SAMM50-203ENST00000474323 C10orf142B7Z368 130 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 IFNA21P01568 189 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 TRGC2P03986 189 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 IL2RGP31785 369 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 OR3A2P47893 321 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 CCR5P51681 352 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 ERVFRD-1P60508 538 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 INSM1Q01101 510 aaPredicted RBP12.83□□□□□ -0.36
SAMM50-203ENST00000474323 NHLH2Q02577 135 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 ZP2Q05996 745 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.83□□□□□ -0.36
SAMM50-203ENST00000474323 AKR1C8PQ5T2L2 129 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 FIGLAQ6QHK4 219 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 RTN4RL2Q86UN3 420 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 PATE1Q8WXA2 126 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
SAMM50-203ENST00000474323 NICN1Q9BSH3 213 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 VSX1Q9NZR4 365 aaPredicted RBP12.83□□□□□ -0.36
SAMM50-203ENST00000474323 PRODH2Q9UF12 536 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 TCFL5Q9UL49 500 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 MRPS17Q9Y2R5 130 aaKnown RBP12.83□□□□□ -0.36
SAMM50-203ENST00000474323 IGHV1OR15-9A0A0B4J2B8 117 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 TMEM269A0A1B0GVZ9 245 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 SMCO3A2RU48 225 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 H0YGG7 62 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 CLDN4O14493 209 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 THEGLP0DJG4 465 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 CCR4P51679 360 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 UBE2KP61086 200 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 ARF3P61204 181 aaPredicted RBP12.83□□□□□ -0.36
SAMM50-203ENST00000474323 RPL27P61353 136 aaKnown RBP12.83□□□□□ -0.36
SAMM50-203ENST00000474323 OR8G1Q15617 311 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 C21orf62-AS1Q17RA5 79 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 PLAC9Q5JTB6 97 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 C1QL3Q5VWW1 255 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 DEFB123Q8N688 67 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 ZFYVE21Q9BQ24 234 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 WASF3Q9UPY6 502 aa12.83□□□□□ -0.36
SAMM50-203ENST00000474323 LSM5Q9Y4Y9 91 aaKnown RBP12.83□□□□□ -0.36
SAMM50-203ENST00000474323 C11orf98E9PRG8 122 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 P2RY10O00398 339 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 CYB5BO43169 146 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 TGOLN2O43493 480 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 C1QL1O75973 258 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 CELA2BP08218 269 aaPredicted RBP12.82□□□□□ -0.36
SAMM50-203ENST00000474323 RNH1P13489 461 aaKnown RBP12.82□□□□□ -0.36
SAMM50-203ENST00000474323 AMY2BP19961 511 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 FGF7P21781 194 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 CASP6P55212 293 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 RAB38P57729 211 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 TAS2R46P59540 309 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 PCK2Q16822 640 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 GPR157Q5UAW9 335 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 DPPA2Q7Z7J5 298 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 SFTPA2Q8IWL1 248 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 ARHGEF39Q8N4T4 335 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 GATSQ8NAP1 163 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 AVL9Q8NBF6 648 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 APCDD1LQ8NCL9 501 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 ZNF519Q8TB69 540 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 RARRES2Q99969 163 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 SMOC1Q9H4F8 434 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 SRPK3Q9UPE1 567 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 C14orf166Q9Y224 244 aaKnown RBP12.82□□□□□ -0.36
SAMM50-203ENST00000474323 HS3ST3B1Q9Y662 390 aa12.82□□□□□ -0.36
SAMM50-203ENST00000474323 A0A0A6YYD4 124 aa12.81□□□□□ -0.36
SAMM50-203ENST00000474323 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
SAMM50-203ENST00000474323 A8MVM7 634 aa12.81□□□□□ -0.36
SAMM50-203ENST00000474323 TNFP01375 233 aa12.81□□□□□ -0.36
SAMM50-203ENST00000474323 TRGC1P0CF51 173 aa12.81□□□□□ -0.36
SAMM50-203ENST00000474323 CTLA4P16410 223 aa12.81□□□□□ -0.36
SAMM50-203ENST00000474323 PPP1CCP36873 323 aaKnown RBP12.81□□□□□ -0.36
SAMM50-203ENST00000474323 GABRA4P48169 554 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms