RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 C1orf123Q9NWV4 160 aa14.29□□□□□ -0.12
CCM2-205ENST00000472223 NDUFA13Q9P0J0 144 aa14.29□□□□□ -0.12
CCM2-205ENST00000472223 IGKV1-9A0A0C4DH69 117 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 IGHV3-64DA0A0J9YX35 117 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 LOC100289279A0A1B0GTE1 492 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 HPXP02790 462 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 TMEM225BP0DP42 221 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 RAB3BP20337 219 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 GATA4P43694 442 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 TMBIM6P55061 237 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 FAM76BQ5HYJ3 339 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 PRAMEF6Q5VXH4 476 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 OR52N4Q8NGI2 321 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 OR51A2Q8NGJ7 313 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 CCL17Q92583 94 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 BCL7BQ9BQE9 202 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 CENPOQ9BU64 300 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 PKIBQ9C010 78 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 FAM192AQ9GZU8 254 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 OR51I2Q9H344 312 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 GCM1Q9NP62 436 aa14.28□□□□□ -0.12
CCM2-205ENST00000472223 ZNF701Q9NV72 531 aaPredicted RBP14.28□□□□□ -0.12
CCM2-205ENST00000472223 J3QT63 122 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 CDIPTO14735 213 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 CDC14BO60729 498 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 PLATP00750 562 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 PTH2RP49190 550 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 POU3F4P49335 361 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 ZNF154Q13106 437 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 CARTPTQ16568 116 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 DEFB113Q30KQ7 82 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 CDH24Q86UP0 819 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 SCCPDHQ8NBX0 429 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 ZNF420Q8TAQ5 688 aaPredicted RBP14.27□□□□□ -0.13
CCM2-205ENST00000472223 IGFBPL1Q8WX77 278 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 RPL3LQ92901 407 aaKnown RBP14.27□□□□□ -0.13
CCM2-205ENST00000472223 PERPQ96FX8 193 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 TIMD4Q96H15 378 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 UQCC2Q9BRT2 126 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 GSX2Q9BZM3 304 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 PPIL3Q9H2H8 161 aaKnown RBP14.27□□□□□ -0.13
CCM2-205ENST00000472223 METTL17Q9H7H0 456 aaPredicted RBP14.27□□□□□ -0.13
CCM2-205ENST00000472223 ELL3Q9HB65 397 aaPredicted RBP14.27□□□□□ -0.13
CCM2-205ENST00000472223 PLGRKTQ9HBL7 147 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 RNF7Q9UBF6 113 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 V9GY05 133 aa14.27□□□□□ -0.13
CCM2-205ENST00000472223 CACNA1DQ01668 2161 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 TRAPPC2LH3BP13 241 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 SSX4O60224 188 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 GABARAPO95166 117 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 CDRT1O95170 752 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 PTBP3O95758 552 aaKnown RBP14.26□□□□□ -0.13
CCM2-205ENST00000472223 CSF3P09919 207 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 PAX1P15863 534 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 IL24Q13007 206 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 MPPED2Q15777 294 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 LRRTM1Q86UE6 522 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 ANGPTL5Q86XS5 388 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 CROCCP3Q8IVE0 287 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 LRRC75A-AS1Q8N1F1 130 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 TNFAIP8L1Q8WVP5 186 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 RFT1Q96AA3 541 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 MBD6Q96DN6 1003 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 SPACA5Q96QH8 159 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 ING4Q9UNL4 249 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 AK6Q9Y3D8 172 aaKnown RBP14.26□□□□□ -0.13
CCM2-205ENST00000472223 HECTD1Q9ULT8 2610 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 DYSFO75923 2080 aa14.26□□□□□ -0.13
CCM2-205ENST00000472223 AKAP6Q13023 2319 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 SMIM31A0A1B0GVY4 71 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 CLDN25C9JDP6 229 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 SLC22A1O15245 554 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 NCR1O76036 304 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 SDC2P34741 201 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 SERPINB10P48595 397 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 PDLIM4P50479 330 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 CAPZA1P52907 286 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 DSCR9P59020 149 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 VBP1P61758 197 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 PDZK1IP1Q13113 114 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 GPR176Q14439 515 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 ZNF181Q2M3W8 571 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 ASPHD2Q6ICH7 369 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 FIP1L1Q6UN15 594 aaKnown RBP14.25□□□□□ -0.13
CCM2-205ENST00000472223 CLEC2AQ6UVW9 174 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 USP43Q70EL4 1123 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 SLC25A26Q70HW3 274 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 Q8IYB0 196 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 ZSCAN4Q8NAM6 433 aaPredicted RBP14.25□□□□□ -0.13
CCM2-205ENST00000472223 OR10Z1Q8NGY1 313 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 OR51F2Q8NH61 342 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 Q8TCH9 128 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 AQP3Q92482 292 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 RAB1CQ92928 201 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 TLNRD1Q9H1K6 362 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 CHODLQ9H9P2 273 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 SMURF1Q9HCE7 757 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 TMEM106BQ9NUM4 274 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 TREM2Q9NZC2 230 aa14.25□□□□□ -0.13
CCM2-205ENST00000472223 CHD3Q12873 2000 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms