RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 INTS14Q96SY0 518 aa7.42□□□□□ -1.22
CPSF4-211ENST00000471455 EGLN3Q9H6Z9 239 aa7.42□□□□□ -1.22
CPSF4-211ENST00000471455 ABCB10Q9NRK6 738 aa7.42□□□□□ -1.22
CPSF4-211ENST00000471455 IL20Q9NYY1 176 aa7.42□□□□□ -1.22
CPSF4-211ENST00000471455 PITPNC1Q9UKF7 332 aa7.42□□□□□ -1.22
CPSF4-211ENST00000471455 FOXJ3Q9UPW0 622 aa7.42□□□□□ -1.22
CPSF4-211ENST00000471455 SIGLEC9Q9Y336 463 aa7.42□□□□□ -1.22
CPSF4-211ENST00000471455 RHBDD3Q9Y3P4 386 aa7.42□□□□□ -1.22
CPSF4-211ENST00000471455 ZNF850A8MQ14 1090 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 SLC1A7O00341 560 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 AKR7A2O43488 359 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 SEMG1P04279 462 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 H2BFMP0C1H6 154 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 AMY2BP19961 511 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 ERVFRD-1P60508 538 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 ELF3P78545 371 aaPredicted RBP7.41□□□□□ -1.22
CPSF4-211ENST00000471455 MXRA7P84157 204 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 CRMP1Q14194 572 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 SMIM21Q3B7S5 101 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 RASSF6Q6ZTQ3 369 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 ERI1Q8IV48 349 aaKnown RBP7.41□□□□□ -1.22
CPSF4-211ENST00000471455 OR6N2Q8NGY6 317 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 OR5K1Q8NHB7 308 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 ZNF671Q8TAW3 534 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 OR5P3Q8WZ94 311 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 RPL3LQ92901 407 aaKnown RBP7.41□□□□□ -1.22
CPSF4-211ENST00000471455 R3HDM4Q96D70 268 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 SEH1LQ96EE3 360 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 RNF170Q96K19 258 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 Q96M66 194 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 DDOQ99489 341 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 NKX3-1Q99801 234 aaPredicted RBP7.41□□□□□ -1.22
CPSF4-211ENST00000471455 TSSK6Q9BXA6 273 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 WDR13Q9H1Z4 485 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 RASL12Q9NYN1 266 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 USE1Q9NZ43 259 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 DNAJC27Q9NZQ0 273 aa7.41□□□□□ -1.22
CPSF4-211ENST00000471455 OR5B21A6NL26 309 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 VGLL3A8MV65 326 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 TNFRSF11BO00300 401 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 CCNB2O95067 398 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 GYPBP06028 91 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 PSKH1P11801 424 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 ANOS1P23352 680 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 PRDX6P30041 224 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 OPRL1P41146 370 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 BMXP51813 675 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 DLX1P56177 255 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 RPL31P62899 125 aaKnown RBP7.4□□□□□ -1.22
CPSF4-211ENST00000471455 GNG3P63215 75 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 FAM76BQ5HYJ3 339 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 VAX1Q5SQQ9 334 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 THAP5Q7Z6K1 395 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 Q8N2B8 174 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 RPS4Y2Q8TD47 263 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 PIGCQ92535 297 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 RORBQ92753 470 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 PHF21AQ96BD5 680 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 SDSLQ96GA7 329 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 ABHD6Q9BV23 337 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 NMNAT2Q9BZQ4 307 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 PRSS22Q9GZN4 317 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 CCDC134Q9H6E4 229 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 NIPAL2Q9H841 368 aa7.4□□□□□ -1.22
CPSF4-211ENST00000471455 AURKAIP1Q9NWT8 199 aaPredicted RBP7.4□□□□□ -1.22
CPSF4-211ENST00000471455 IGKV1D-17A0A075B6S4 117 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 CHST1O43916 411 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 HTR3BO95264 441 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 CLIC3O95833 236 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 LYNP07948 512 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 PSG2P11465 335 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 HSD17B1P14061 328 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 ATP6V1B1P15313 513 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 COX7A1P24310 79 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 GPM6AP51674 278 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 HMGA2P52926 109 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 CNN3Q15417 329 aaKnown RBP7.39□□□□□ -1.23
CPSF4-211ENST00000471455 SPATS1Q496A3 300 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 KLHL12Q53G59 568 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 HCP5Q6MZN7 132 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 CRIP3Q6Q6R5 217 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 PRSS45Q7RTY3 260 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 MKXQ8IYA7 352 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 ZNF561Q8N587 486 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 RNF148Q8N7C7 305 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 AQP11Q8NBQ7 271 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 ZNRF1Q8ND25 227 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 OR9Q2Q8NGE9 314 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 TEX47Q8TBZ9 253 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 ZNRF4Q8WWF5 429 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 HPSE2Q8WWQ2 592 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 MMP28Q9H239 520 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 C1orf21Q9H246 121 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 ZNF702PQ9H963 129 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 ELL3Q9HB65 397 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-211ENST00000471455 CMC2Q9NRP2 79 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 NDE1Q9NXR1 346 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-211ENST00000471455 ZNF222Q9UK12 451 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms