RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 ZNF573Q86YE8 665 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 SERPINA12Q8IW75 414 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 MUC20Q8N307 709 aaPredicted RBP10.03□□□□□ -0.8
VPS13D-204ENST00000469054 SPICQ8N5J4 248 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 PARP16Q8N5Y8 322 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 OR5D14Q8NGL3 314 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 OR10Z1Q8NGY1 313 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 TRMT10AQ8TBZ6 339 aaKnown RBP10.03□□□□□ -0.8
VPS13D-204ENST00000469054 LRRC29Q8WV35 223 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 SMR3AQ99954 134 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 GAL3ST1Q99999 423 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 ZCCHC4Q9H5U6 513 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 TMEM165Q9HC07 324 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 ITPR3Q14573 2671 aa10.02□□□□□ -0.8
VPS13D-204ENST00000469054 TRBV5-5A0A0J9YX44 114 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 FAM230AA0A1W2PPH8 454 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 ALX3O95076 343 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 CD2P06729 351 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 HEXAP06865 529 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 EGR1P18146 543 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 PRKACBP22694 351 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 GZMKP49863 264 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 RPS11P62280 158 aaKnown RBP eCLIP10.02□□□□□ -0.81
VPS13D-204ENST00000469054 GPR50Q13585 617 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 TBCEQ15813 527 aaPredicted RBP10.02□□□□□ -0.81
VPS13D-204ENST00000469054 CYB5R2Q6BCY4 276 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 SFRP4Q6FHJ7 346 aaPredicted RBP10.02□□□□□ -0.81
VPS13D-204ENST00000469054 BOLLQ8N9W6 283 aaKnown RBP10.02□□□□□ -0.81
VPS13D-204ENST00000469054 C19orf18Q8NEA5 215 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 DNAAF1Q8NEP3 725 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 OR13C5Q8NGS8 318 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 ZNF671Q8TAW3 534 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 NPRL2Q8WTW4 380 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 AQP3Q92482 292 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 TMEM106AQ96A25 262 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 SPSB1Q96BD6 273 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 BORCS8Q96FH0 119 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 GSX1Q9H4S2 264 aaPredicted RBP10.02□□□□□ -0.81
VPS13D-204ENST00000469054 ZNF665Q9H7R5 613 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 ISYNA1Q9NPH2 558 aa10.02□□□□□ -0.81
VPS13D-204ENST00000469054 F8P00451 2351 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 IGKV1-27A0A075B6S5 117 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 TRAV38-1A0A0B4J264 116 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 OOEPA6NGQ2 149 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 CEACAM18A8MTB9 384 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 SRRM5B3KS81 715 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 J3QT63 122 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 LGALS8O00214 317 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 AKR7A2O43488 359 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 RHBDL1O75783 438 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 LY6G6DO95868 133 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 IGHV2-5P01817 119 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 OCMP0CE72 109 aaPredicted RBP10.01□□□□□ -0.81
VPS13D-204ENST00000469054 HSMCR30P0CW71 290 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 IGHV4-31P0DP07 118 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 AZGP1P25311 298 aaKnown RBP10.01□□□□□ -0.81
VPS13D-204ENST00000469054 RBP2P50120 134 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 ATP1B3P54709 279 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 EMX1Q04741 257 aaPredicted RBP10.01□□□□□ -0.81
VPS13D-204ENST00000469054 MLLT11Q13015 90 aaPredicted RBP10.01□□□□□ -0.81
VPS13D-204ENST00000469054 KCNJ8Q15842 424 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 ZNF404Q494X3 552 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 Q499Y3 187 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 TEX36Q5VZQ5 186 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 CLEC9AQ6UXN8 241 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 ANGPTL5Q86XS5 388 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 SPARTQ8N0X7 666 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 SVOPQ8N4V2 548 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 DEFB108BQ8NET1 73 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 OR13C9Q8NGT0 318 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 UFD1Q92890 307 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 RAB39BQ96DA2 213 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 C1orf159Q96HA4 380 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 OPALINQ96PE5 141 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 MGLLQ99685 303 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 TMEM246Q9BRR3 403 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 PKIBQ9C010 78 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 PATZ1Q9HBE1 687 aaKnown RBP10.01□□□□□ -0.81
VPS13D-204ENST00000469054 NEK6Q9HC98 313 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 ACOT13Q9NPJ3 140 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 PCDHB10Q9UN67 800 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 POLDIP2Q9Y2S7 368 aa10.01□□□□□ -0.81
VPS13D-204ENST00000469054 CHD3Q12873 2000 aaKnown RBP10□□□□□ -0.81
VPS13D-204ENST00000469054 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10□□□□□ -0.81
VPS13D-204ENST00000469054 SULT1B1O43704 296 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 SYNGR1O43759 233 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 CD5LO43866 347 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 MUC1P15941 1255 aaPredicted RBP10□□□□□ -0.81
VPS13D-204ENST00000469054 GLRA1P23415 457 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 CPT2P23786 658 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 MPZP25189 248 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 CD80P33681 288 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 MTCP1P56278 107 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 KRTAP1-1Q07627 177 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 TPBGQ13641 420 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 MICBQ29980 383 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 KCTD21Q4G0X4 260 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 ASPHD2Q6ICH7 369 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 ZNF529Q6P280 563 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 DCDC5Q6ZRR9 648 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms