RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	OR6M1	Q8NGM8	313 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	OR6Q1	Q8NGQ2	317 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	MS4A3	Q96HJ5	214 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	SLC22A4	Q9H015	551 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	METTL17	Q9H7H0	456 aa	Predicted RBP	10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	HMG20A	Q9NP66	347 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	MYOZ1	Q9NP98	299 aa	Predicted RBP	10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	TAS2R4	Q9NYW5	299 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	GHRL	Q9UBU3	117 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	SPATA2	Q9UM82	520 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	PIGL	Q9Y2B2	252 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	STARD10	Q9Y365	291 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	AK6	Q9Y3D8	172 aa	Known RBP	10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	MPC1	Q9Y5U8	109 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	ETV7	Q9Y603	341 aa		10.28	□□□□□ -0.76
CTNS-205	ENST00000467663	JMJD1C	Q15652	2540 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	ARFGEF3	Q5TH69	2177 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	GGT3P	A6NGU5	568 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	SLC17A2	O00624	439 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	TPPP	O94811	219 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	MAS1	P04201	325 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	CLEC2L	P0C7M8	214 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	ATF1	P18846	271 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	PTBP1	P26599	531 aa	Known RBP eCLIP	10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	GLRX	P35754	106 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	ETV6	P41212	452 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	WNT5A	P41221	380 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	PDLIM4	P50479	330 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	ZNF45	Q02386	682 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	SNTB2	Q13425	540 aa	Known RBP	10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	IDNK	Q5T6J7	187 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	METAP1D	Q6UB28	335 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	PNLDC1	Q8NA58	520 aa	Known RBP	10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	OR1J1	Q8NGS3	322 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	TBC1D15	Q8TC07	691 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	PTX4	Q96A99	478 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	HAVCR1	Q96D42	359 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	CEP19	Q96LK0	163 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	VRK1	Q99986	396 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	WDR12	Q9GZL7	423 aa	Known RBP	10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	C6orf62	Q9GZU0	229 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	PLGRKT	Q9HBL7	147 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	SMURF1	Q9HCE7	757 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	YAE1D1	Q9NRH1	226 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	MRPL15	Q9P015	296 aa	Known RBP	10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	STEAP1	Q9UHE8	339 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	SLC7A11	Q9UPY5	501 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	CMAHP	Q9Y471	501 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	ABCA1	O95477	2261 aa		10.27	□□□□□ -0.77
CTNS-205	ENST00000467663	ANKRD30BL	A7E2S9	258 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	CD300LB	A8K4G0	201 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	CLDN25	C9JDP6	229 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	NRAS	P01111	189 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	NGF	P01138	241 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	UBB	P0CG47	229 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	CCL2	P13500	99 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	ADRA2C	P18825	462 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	USF1	P22415	310 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	MAGEB1	P43366	347 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	EVX1	P49640	407 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	BMX	P51813	675 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	FUT6	P51993	359 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	SELENOV	P59797	346 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	MZT1	Q08AG7	82 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	SPANXN2	Q5MJ10	180 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	MBNL2	Q5VZF2	373 aa	Known RBP	10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	ASPHD2	Q6ICH7	369 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	FAM166A	Q6J272	317 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	LHFPL2	Q6ZUX7	228 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	LRRC28	Q86X40	367 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	ZNF101	Q8IZC7	436 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	OR2AE1	Q8NHA4	323 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	ZNF671	Q8TAW3	534 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	RAB1B	Q9H0U4	201 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	PCDHB16	Q9NRJ7	776 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	PTTG3P	Q9NZH4	202 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	CGGBP1	Q9UFW8	167 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNS-205	ENST00000467663	DAPK2	Q9UIK4	370 aa		10.26	□□□□□ -0.77
CTNS-205	ENST00000467663		A8MV72	311 aa	Predicted RBP	10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	IQCF6	A8MYZ5	107 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	RGS5	O15539	181 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	GMDS	O60547	372 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	APOA1	P02647	267 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	HCK	P08631	526 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	FAH	P16930	419 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	KITLG	P21583	273 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	HTR2C	P28335	458 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	GCH1	P30793	250 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	THBS2	P35442	1172 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	ZNF93	P35789	620 aa	Predicted RBP	10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	ALDH3B1	P43353	468 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	NR4A2	P43354	598 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	OR10A3	P58181	314 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	ZNF846	Q147U1	533 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	RAB11B	Q15907	218 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	MSMP	Q1L6U9	139 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	BAIAP2L2	Q6UXY1	529 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	RFPL4B	Q6ZWI9	263 aa		10.25	□□□□□ -0.77
CTNS-205	ENST00000467663	NR2C2AP	Q86WQ0	139 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms