RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TMEM42Q69YG0 159 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 YIPF7Q8N8F6 280 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 AQP3Q92482 292 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 ITFG2Q969R8 447 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 PRDM13Q9H4Q3 707 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 S100A14Q9HCY8 104 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 GPR173Q9NS66 373 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 USE1Q9NZ43 259 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 NLKQ9UBE8 527 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 SNX5Q9Y5X3 404 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 IGKV1D-17A0A075B6S4 117 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 OR5B21A6NL26 309 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 H3BSH0 61 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 NDUFB3O43676 98 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 NRASP01111 189 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 RNASE1P07998 156 aaKnown RBP17.95■□□□□ 0.46
LIME1-203ENST00000465591 OR2T7P0C7T2 308 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 HKR1P10072 659 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 GLRA1P23415 457 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 ODF4Q2M2E3 257 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 C11orf91Q3C1V1 193 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 ZIK1Q3SY52 487 aaPredicted RBP17.95■□□□□ 0.46
LIME1-203ENST00000465591 HAGHLQ6PII5 290 aaPredicted RBP17.95■□□□□ 0.46
LIME1-203ENST00000465591 Q6ZSR3 168 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 OR10H4Q8NGA5 316 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 OR2T27Q8NH04 317 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 RORBQ92753 470 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 LHX4Q969G2 390 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 ZNF488Q96MN9 340 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 CNTD2Q9H8S5 307 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 ZNF222Q9UK12 451 aa17.95■□□□□ 0.46
LIME1-203ENST00000465591 OR2AT4A6NND4 320 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 ANKRD65E5RJM6 399 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 CLDN34H7C241 214 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 HOXA3O43365 443 aaPredicted RBP17.94■□□□□ 0.46
LIME1-203ENST00000465591 MTRF1O75570 445 aaKnown RBP17.94■□□□□ 0.46
LIME1-203ENST00000465591 KRT8P05787 483 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 DLX1P56177 255 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 ZNF85Q03923 595 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 PRB3Q04118 309 aaPredicted RBP17.94■□□□□ 0.46
LIME1-203ENST00000465591 CATSPERDQ86XM0 798 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 PDZD9Q8IXQ8 264 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 RNF166Q96A37 237 aaPredicted RBP17.94■□□□□ 0.46
LIME1-203ENST00000465591 HRASLS5Q96KN8 279 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 DCTN5Q9BTE1 182 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 DNTTIP1Q9H147 329 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 AASSQ9UDR5 926 aa17.94■□□□□ 0.46
LIME1-203ENST00000465591 METTL15A6NJ78 407 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 SIGLEC5O15389 551 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 SYNGR1O43759 233 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 ENTPD6O75354 484 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 PSG2P11465 335 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 CCL1P22362 96 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 CDC42P60953 191 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 CDONQ4KMG0 1287 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 LRRC10Q5BKY1 277 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 CLVS2Q5SYC1 327 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 CBR4Q8N4T8 237 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 MBOAT4Q96T53 435 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 ZMAT3Q9HA38 289 aaKnown RBP17.93■□□□□ 0.46
LIME1-203ENST00000465591 ELL3Q9HB65 397 aaPredicted RBP17.93■□□□□ 0.46
LIME1-203ENST00000465591 ONECUT1Q9UBC0 465 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 MAB21L2Q9Y586 359 aa17.93■□□□□ 0.46
LIME1-203ENST00000465591 IGHV1-69DA0A0B4J2H0 117 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 PQLC2LA1A4F0 135 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 NKX6-3A6NJ46 265 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 IGHV1-69P01742 117 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 ACAA1P09110 424 aaPredicted RBP17.92■□□□□ 0.46
LIME1-203ENST00000465591 ALDH3A2P51648 485 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 BPIFB3P59826 476 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 ISL1P61371 349 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 IL13RA1P78552 427 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 TMED1Q13445 227 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 PDCD1Q15116 288 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 VMO1Q7Z5L0 202 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 PRSS35Q8N3Z0 413 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 Q8N7P7 452 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 C3orf56Q8N813 242 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 C8orf46Q8TAG6 207 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 H1FXQ92522 213 aaKnown RBP17.92■□□□□ 0.46
LIME1-203ENST00000465591 SLC25A28Q96A46 364 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 TMIGD2Q96BF3 282 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 SLC25A10Q9UBX3 287 aaPredicted RBP17.92■□□□□ 0.46
LIME1-203ENST00000465591 KPTNQ9Y664 436 aa17.92■□□□□ 0.46
LIME1-203ENST00000465591 DLGAP1O14490 977 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 SULT1C4O75897 302 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 ATP6V1E1P36543 226 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 HAAOP46952 286 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 GABRA2P47869 451 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 TP53I3Q53FA7 332 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 Q6YL49 198 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 BATF2Q8N1L9 274 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 POC1AQ8NBT0 407 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 ZNRF1Q8ND25 227 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 ZNF671Q8TAW3 534 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 TRUB1Q8WWH5 349 aaKnown RBP17.91■□□□□ 0.46
LIME1-203ENST00000465591 GATAD2BQ8WXI9 593 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 RFKQ969G6 155 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 ZDHHC16Q969W1 377 aa17.91■□□□□ 0.46
LIME1-203ENST00000465591 MED30Q96HR3 178 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms