RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 DCTP40126 519 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 PTGFRP43088 359 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 MAGEA2P43356 314 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 HTR5AP47898 357 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 KHKP50053 298 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 CCR4P51679 360 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 CRYBA2P53672 197 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 PRRX1P54821 245 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 ARF6P62330 175 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 PPIAP62937 165 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 MS4A2Q01362 244 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 PLGLB1Q02325 96 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF117Q03924 483 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 TNFRSF9Q07011 255 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 SPOCK1Q08629 439 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GK2Q14410 553 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GANABQ14697 944 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 RGNQ15493 299 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 HYAL4Q2M3T9 481 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 ARHGAP11BQ3KRB8 267 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 KLHL22Q53GT1 634 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 Q5PR19 223 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GCNT6Q5T4J0 391 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 LCN8Q6JVE9 175 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 METAP1DQ6UB28 335 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 BAIAP2L2Q6UXY1 529 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 SPNS3Q6ZMD2 512 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 MEX3BQ6ZN04 569 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF836Q6ZNA1 936 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 C17orf107Q6ZR85 190 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC16A14Q7RTX9 510 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 RBM45Q8IUH3 476 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 SIAH3Q8IW03 269 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 RPRMLQ8N4K4 120 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 MS4A15Q8N5U1 240 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 C19orf18Q8NEA5 215 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF555Q8NEP9 628 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 ATP6V1C2Q8NEY4 427 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 OR4D11Q8NGI4 311 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 OR8D4Q8NGM9 314 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 OR10S1Q8NGN2 331 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 OR5M9Q8NGP3 310 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 OR1J2Q8NGS2 313 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 OR10A6Q8NH74 314 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 CYGBQ8WWM9 190 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 TM9SF4Q92544 642 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 OSTF1Q92882 214 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 SLCO4A1Q96BD0 722 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 NTNG2Q96CW9 530 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 LRRC58Q96CX6 371 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 RAB3CQ96E17 227 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 RBP7Q96R05 134 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 SDHCQ99643 169 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 MARVELD1Q9BSK0 173 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 DOHHQ9BU89 302 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 ANGPTL4Q9BY76 406 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 TMEM185BQ9H7F4 350 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 CALML5Q9NZT1 146 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GHRLQ9UBU3 117 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 SEC14L3Q9UDX4 400 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 VDAC3Q9Y277 283 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 FN1P02751 2386 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 APCP25054 2843 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 CSMD2Q7Z408 3487 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 A0A1B0GTH9 108 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 PLSCR5A0PG75 271 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 DHRS12A0PJE2 317 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 C7orf66A4D0T2 115 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 TRAPPC13A5PLN9 417 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 BBIP1A8MTZ0 92 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 NPIPA3F8WFD2 350 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 M0R233 179 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC1A7O00341 560 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 TP53I11O14683 189 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 SIGLEC5O15389 551 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 EFNA2O43921 213 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 KIAA0513O60268 411 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ZIC3O60481 467 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 AQP8O94778 261 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 GLSO94925 669 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 AK1P00568 194 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 IGHV2-5P01817 119 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 IFNA6P05013 189 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 SPP1P10451 314 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 NR2C1P13056 603 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 HSD17B1P14061 328 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 GPX2P18283 190 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 TBXA2RP21731 343 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 GDF1P27539 372 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 GSK3BP49841 420 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 IDH3GP51553 393 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 TDGF1P3P51864 188 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 RAG2P55895 527 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 B3GALT5-AS1P59052 145 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 SNRPD2P62316 118 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 SIRPAP78324 504 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 MRPS11P82912 194 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ADORA2A-AS1P86434 159 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 CDK6Q00534 326 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms