RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 UNC13CQ8NB66 2214 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 ZPLD1Q8TCW7 415 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 SCMH1Q96GD3 660 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 FAAP24Q9BTP7 215 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 RP1P56715 2156 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 TRIM77I1YAP6 450 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 NDUFA6P56556 154 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF92Q03936 586 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF468Q5VIY5 522 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-205ENST00000460170 C9orf62Q8N4C0 152 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 OR11H7Q8NGC8 314 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 OR2M5A3KFT3 312 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 C4orf51C9J302 202 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 H3BMH7 237 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 OR2C1O95371 312 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 CRYAAP02489 173 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 KIAA0141Q14154 515 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-205ENST00000460170 TMEM88Q6PEY1 159 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 THNSL2Q86YJ6 484 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 C20orf196Q8IYI0 205 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 OR10D3Q8NH80 312 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 HPSE2Q8WWQ2 592 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 RHOFQ9HBH0 211 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 DECR2Q9NUI1 292 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 PROCRQ9UNN8 238 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 PCDHGA9Q9Y5G4 932 aaKnown RBP13.12□□□□□ -0.31
PTPRU-205ENST00000460170 ENSAO43768 121 aaKnown RBP13.11□□□□□ -0.31
PTPRU-205ENST00000460170 IL2RAP01589 272 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 PDCD1Q15116 288 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF718Q3SXZ3 478 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 UQCC3Q6UW78 93 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 H1FXQ92522 213 aaKnown RBP13.11□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF768Q9H5H4 540 aaKnown RBP13.11□□□□□ -0.31
PTPRU-205ENST00000460170 RCL1Q9Y2P8 373 aaKnown RBP13.11□□□□□ -0.31
PTPRU-205ENST00000460170 TRIM64BA6NI03 449 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 PPP1R2P9O14990 202 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 HLA-DOBP13765 273 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 NANOS3P60323 173 aaKnown RBP13.11□□□□□ -0.31
PTPRU-205ENST00000460170 TMEM9BQ9NQ34 198 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 PLA2G3Q9NZ20 509 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 AQP7P3A6NL99 342 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 CST4P01036 141 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 IAPPP10997 89 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 FOSL1P15407 271 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 GNG3P63215 75 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 PABPC1L2AQ5JQF8 200 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 B3GNTL1Q67FW5 361 aaPredicted RBP13.11□□□□□ -0.31
PTPRU-205ENST00000460170 TMEM123Q8N131 208 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 LIN37Q96GY3 246 aaPredicted RBP13.11□□□□□ -0.31
PTPRU-205ENST00000460170 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 RAB27BO00194 218 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 CD1AP06126 327 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 GPR12P47775 334 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 THBS3P49746 956 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 FABP6P51161 128 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 LSM6P62312 80 aaKnown RBP13.11□□□□□ -0.31
PTPRU-205ENST00000460170 SPATA46Q5T0L3 261 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 OR10P1Q8NGE3 313 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 FN3KRPQ9HA64 309 aa13.11□□□□□ -0.31
PTPRU-205ENST00000460170 FCARP24071 287 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 RAC3P60763 192 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 FAHD2BQ6P2I3 314 aaPredicted RBP13.1□□□□□ -0.31
PTPRU-205ENST00000460170 CD200R1LQ6Q8B3 271 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 OR2I1PQ8NGU4 316 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF721Q8TF20 911 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 LHX4Q969G2 390 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
PTPRU-205ENST00000460170 FAHD2AQ96GK7 314 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 RPS2P15880 293 aaKnown RBP13.1□□□□□ -0.31
PTPRU-205ENST00000460170 ACKR3P25106 362 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 GSK3AP49840 483 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 RAB32Q13637 225 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 JMJD6Q6NYC1 403 aaPredicted RBP13.1□□□□□ -0.31
PTPRU-205ENST00000460170 SLC22A18ASQ8N1D0 253 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 IL34Q6ZMJ4 242 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 C2CD4CQ8TF44 421 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 TMED3Q9Y3Q3 217 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 NDUFB7P17568 137 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 MMP16P51512 607 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 SSPNQ14714 243 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 OR2Y1Q8NGV0 311 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 RNF133Q8WVZ7 376 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 EDEM2Q9BV94 578 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 PSENENQ9NZ42 101 aa13.1□□□□□ -0.31
PTPRU-205ENST00000460170 CACNA1IQ9P0X4 2223 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 C7orf66A4D0T2 115 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 PDCD6O75340 191 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 ARL3P36405 182 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF239Q16600 458 aaKnown RBP13.09□□□□□ -0.31
PTPRU-205ENST00000460170 GCNT2Q8N0V5 402 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 RFLNBQ8N5W9 214 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 TET1Q8NFU7 2136 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 PIK3IP1Q96FE7 263 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 TRGV5A0A0B4J1U4 118 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 C1orf87Q8N0U7 546 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 RBMXL3Q8N7X1 1067 aaKnown RBP13.09□□□□□ -0.31
PTPRU-205ENST00000460170 OR1J1Q8NGS3 322 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 PHYHIPLQ96FC7 376 aa13.09□□□□□ -0.31
PTPRU-205ENST00000460170 EGLN1Q9GZT9 426 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms