RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 NMES1Q9C002 83 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 SLC5A7Q9GZV3 580 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 KCNJ16Q9NPI9 418 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 AURKAIP1Q9NWT8 199 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-218ENST00000456174 STEAP1Q9UHE8 339 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 PADI1Q9ULC6 663 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 IGKV3D-11A0A0A0MRZ8 115 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 TGIF2-C20orf24A0A0A6YYL0 155 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 FAM221AA4D161 298 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 NTN1O95631 604 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 TSPAN15O95858 294 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 CLPSP04118 112 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 THY1P04216 161 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 RPL29P47914 159 aaKnown RBP6.76□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF85Q03923 595 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 CDK5R1Q15078 307 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 NNATQ16517 81 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 LPAL2Q16609 132 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 DECR1Q16698 335 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 STPG1Q5TH74 334 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 SLC23A3Q6PIS1 610 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 SLC25A26Q70HW3 274 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 MEX3DQ86XN8 651 aaKnown RBP6.76□□□□□ -1.33
HDAC9-218ENST00000456174 CPOQ8IVL8 374 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 GABRG1Q8N1C3 465 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 PLPP5Q8NEB5 264 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 OR1P1Q8NH06 330 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 SMIM19Q96E16 107 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 NUDT11Q96G61 164 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 FAM46AQ96IP4 442 aaKnown RBP6.76□□□□□ -1.33
HDAC9-218ENST00000456174 C4orf36Q96KX1 117 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 CCDC74BQ96LY2 380 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 OR6C1Q96RD1 312 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 G6PC3Q9BUM1 346 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 OR2J1Q9GZK6 312 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 MKKSQ9NPJ1 570 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-218ENST00000456174 SRPK3Q9UPE1 567 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 OSGIN2Q9Y236 505 aa6.76□□□□□ -1.33
HDAC9-218ENST00000456174 PUS1Q9Y606 427 aaKnown RBP eCLIP6.76□□□□□ -1.33
HDAC9-218ENST00000456174 ASCC3Q8N3C0 2202 aaKnown RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 A8MVM7 634 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 AHRRA9YTQ3 701 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CYB5BO43169 146 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 UMODP07911 640 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 RAB6AP20340 208 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ID4P47928 161 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CX3CR1P49238 355 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 RAB7AP51149 207 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 NOVA1P51513 510 aaKnown RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 EFNA3P52797 238 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ACTBP60709 375 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ACTA2P62736 377 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ACTG1P63261 375 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ACTG2P63267 376 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ACTC1P68032 377 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ACTA1P68133 377 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CYCSP99999 105 aaKnown RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 HSF1Q00613 529 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 OR1Q1Q15612 314 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 NSDHLQ15738 373 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 FAM189A2Q15884 450 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 RHBDD2Q6NTF9 364 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF343Q6P1L6 599 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 SLC25A42Q86VD7 318 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 MRPL41Q8IXM3 137 aaKnown RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 BCORP1Q8N888 145 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 TMEM229BQ8NBD8 167 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 OR10H4Q8NGA5 316 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CD300LFQ8TDQ1 290 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 SLC25A43Q8WUT9 341 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 TMEM255BQ8WV15 326 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 C20orf144Q9BQM9 153 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ALKBH7Q9BT30 221 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 NELFAQ9H3P2 528 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CDH20Q9HBT6 801 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 SLC7A7Q9UM01 511 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 POLR3KQ9Y2Y1 108 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 V9GY05 133 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 SPEGQ15772 3267 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 A0A1W2PPK0 400 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 MSGN1A6NI15 193 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 PPP5D1E7EU14 171 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 H0YIZ8 118 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 J3QLW9 94 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 RAB27BO00194 218 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 EIF1AYO14602 144 aaKnown RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 PIN1P1O15428 100 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 KCNAB3O43448 404 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 PRKNO60260 465 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF354AO60765 605 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 RAMP1O60894 148 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 AHSA1O95433 338 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 TOMM40O96008 361 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CYB5R3P00387 301 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 HLA-AP01891 365 aaKnown RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CD3DP04234 171 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 GAPDHP04406 335 aaKnown RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 PGA3P0DJD8 388 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF19P17023 458 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 SRMP19623 302 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms