RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TMEM200BQ69YZ2 307 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF770Q6IQ21 691 aaPredicted RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 BAIAP2L2Q6UXY1 529 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PLEKHG7Q6ZR37 379 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TCF23Q7RTU1 214 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 THAP5Q7Z6K1 395 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 NDUFA11Q86Y39 141 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZDHHC23Q8IYP9 409 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 BBS1Q8NFJ9 593 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR4S1Q8NGB4 309 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RP9Q8TA86 221 aaKnown RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 FAM81AQ8TBF8 368 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 GNPDA2Q8TDQ7 276 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 NPRL2Q8WTW4 380 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RNF133Q8WVZ7 376 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RNF170Q96K19 258 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR10A2Q9H208 303 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR51V1Q9H2C8 321 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MUC13Q9H3R2 512 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RANBP3Q9H6Z4 567 aaPredicted RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 GAR1Q9NY12 217 aaKnown RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 IL36RNQ9UBH0 155 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR14J1Q9UGF5 321 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TCF19Q9Y242 345 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SF3B6Q9Y3B4 125 aaKnown RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TENM2Q9NT68 2774 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TRBV23-1A0A0A0MS06 115 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 A6NDX4 124 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RFPL4AA6NLU0 287 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RFPL4AL1F8VTS6 287 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 F2RL2O00254 374 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TNFRSF11BO00300 401 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 XPNPEP2O43895 674 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PEX14O75381 377 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TIPRLO75663 272 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 INMTO95050 263 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 GASTP01350 101 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PF4P02776 101 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 H2BFMP0C1H6 154 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF3P17036 446 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 GSTT1P30711 240 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 VDAC2P45880 294 aaPredicted RBP4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SLC15A1P46059 708 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SLC25A1P53007 311 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HCCSP53701 268 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SNU13P55769 128 aaKnown RBP4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CAV3P56539 151 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 DYNC1I2Q13409 638 aaKnown RBP4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 EDDM3AQ14507 147 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CNN3Q15417 329 aaKnown RBP4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HSP90B2PQ58FF3 399 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ATPAF1Q5TC12 328 aaPredicted RBP4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PLBD1Q6P4A8 553 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HACD2Q6Y1H2 254 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HDXQ7Z353 690 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TIGD4Q8IY51 512 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 C11orf42Q8N5U0 333 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TPRX1Q8N7U7 411 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ASCC1Q8N9N2 400 aaKnown RBP4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR4F17Q8NGA8 305 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR52H1Q8NGJ2 320 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR5D13Q8NGL4 314 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PPP1R14AQ96A00 147 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MCUR1Q96AQ8 359 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PYURFQ96I23 114 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 NSMCE2Q96MF7 247 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR4F4Q96R69 305 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 NIPSNAP1Q9BPW8 284 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HOPXQ9BPY8 73 aaPredicted RBP4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR51I2Q9H344 312 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MAGEL2Q9UJ55 1249 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 GTF2A1LQ9UNN4 478 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 AP3M1Q9Y2T2 418 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 LRP12Q9Y561 859 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HILPDAQ9Y5L2 63 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HYDINQ4G0P3 5121 aa4.82□□□□□ -1.64
HLA-DPA3-207ENST00000454398 KIAA2026Q5HYC2 2103 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TMEM210A6NLX4 147 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ODF3BA8MYP8 253 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 F8VVB4 439 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 F8VWA3 439 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SLC22A2O15244 555 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MAGEB4O15481 346 aaPredicted RBP4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 IDH3BO43837 385 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MTRF1O75570 445 aaKnown RBP4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CCNB2O95067 398 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 LYNP07948 512 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CALCBP10092 127 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 IFNGR2P38484 337 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 DDOSTP39656 456 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 DLX6P56179 175 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 EDDM3BP56851 147 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SMIM11AP58511 58 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SLC34A1Q06495 639 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SMIM21Q3B7S5 101 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 DEFB121Q5J5C9 76 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 UTF1Q5T230 341 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ACP7Q6ZNF0 438 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RASSF6Q6ZTQ3 369 aa4.81□□□□□ -1.64
HLA-DPA3-207ENST00000454398 C18orf65Q6ZTR6 163 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms