RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TMCO1Q9UM00 188 aa3.35□□□□□ -1.87
LINC00393-202ENST00000452852 CFL2Q9Y281 166 aa3.35□□□□□ -1.87
LINC00393-202ENST00000452852 ACOT9Q9Y305 439 aa3.35□□□□□ -1.87
LINC00393-202ENST00000452852 NOTCH3Q9UM47 2321 aa3.35□□□□□ -1.87
LINC00393-202ENST00000452852 TRAV9-2A0A087WT02 112 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 FRG2CA6NGY1 282 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 TUBAL3A6NHL2 446 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 GOLGA6L10A6NI86 522 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 FAM159BA6NKW6 160 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 EEF1E1-BLOC1S5C9J1V9 151 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 PLPP1O14494 284 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 EEF1E1O43324 174 aaKnown RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 SMIM24O75264 130 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 SEMA3DO95025 777 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 WISP3O95389 354 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 H6PDO95479 791 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 GPR75O95800 540 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 C1QAP02745 245 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 IGKV3-11P04433 115 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 SLC35E2BP0CK96 405 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 SLC35E2P0CK97 266 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 CD99P14209 185 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 COX5AP20674 150 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 IL2RGP31785 369 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 PHBP35232 272 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 OPRM1P35372 400 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 DEKP35659 375 aaKnown RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 RPL29P47914 159 aaKnown RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 SERPINB8P50452 374 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 CCNG1P51959 295 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 PLTPP55058 493 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 PKNOX1P55347 436 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 SH3BGRP55822 239 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 FBXW4P57775 412 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 IGLV3-21P80748 117 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 MRPS11P82912 194 aaKnown RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 PAX8Q06710 450 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 C2orf54Q08AI8 447 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 IFT88Q13099 833 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 OXA1LQ15070 435 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 EBPQ15125 230 aaKnown RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 OR52E8Q6IFG1 317 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 TMEM53Q6P2H8 277 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 SCIMPQ6UWF3 145 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 TMUB2Q71RG4 321 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 PGAP1Q75T13 922 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 PAGE2Q7Z2X7 111 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 CMC1Q7Z7K0 106 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 C9orf40Q8IXQ3 194 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 LRRC25Q8N386 305 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 OR7G1Q8NGA0 311 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 OR4K14Q8NGD5 310 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 OR1J4Q8NGS1 313 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 RHEBL1Q8TAI7 183 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 NEIL3Q8TAT5 605 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 TCTEX1D2Q8WW35 142 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 RNASE6Q93091 150 aaKnown RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 HAVCR1Q96D42 359 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 RILPQ96NA2 401 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 OXGR1Q96P68 337 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 SERPINI1Q99574 410 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 OPRPNQ99935 248 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 FOXC2Q99958 501 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 IQCGQ9H095 443 aaKnown RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 RBKSQ9H477 322 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 REEP4Q9H6H4 257 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 IMPAD1Q9NX62 359 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 ZNF629Q9UEG4 869 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 KCNIP3Q9Y2W7 256 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 CHTOPQ9Y3Y2 248 aaKnown RBP3.34□□□□□ -1.87
LINC00393-202ENST00000452852 FAM215AQ9Y5M1 114 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 ZNF780BQ9Y6R6 833 aa3.34□□□□□ -1.87
LINC00393-202ENST00000452852 ABCA12Q86UK0 2595 aa3.34□□□□□ -1.88
LINC00393-202ENST00000452852 NOTCH2Q04721 2471 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 KIAA1549Q9HCM3 1950 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ZFHX3Q15911 3703 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 UQCRHLA0A096LP55 91 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 A0A0A6YYD5 115 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ACOX3O15254 700 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 CLOCKO15516 846 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 RAD51CO43502 376 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ZNF354AO60765 605 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ZNF253O75346 499 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ZNF254O75437 659 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 EEDO75530 441 aaKnown RBP3.33□□□□□ -1.88
LINC00393-202ENST00000452852 OR2J3O76001 311 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 KLHL2O95198 593 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 AIFM1O95831 613 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 EPPINO95925 133 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ACTL6AO96019 429 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 OTCP00480 354 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 HPNP05981 417 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 C2P06681 752 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 KLK1P06870 262 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 RBP1P09455 135 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 RHOXF2BP0C7M4 288 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 CSNK2A2P19784 350 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-202ENST00000452852 KLK2P20151 261 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 TUBG1P23258 451 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 IL12BP29460 328 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms