RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 PHLPP2Q6ZVD8 1323 aa1.79□□□□□ -2.12
USP40-209ENST00000452724 LTBP4Q8N2S1 1624 aa1.79□□□□□ -2.12
USP40-209ENST00000452724 ZNF407Q9C0G0 2248 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 KIAA1671Q9BY89 1806 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 ARPC4-TTLL3A0A0A6YYG9 625 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 TRAV8-6A0A0B4J262 113 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 TRDMT1O14717 391 aaKnown RBP1.78□□□□□ -2.12
USP40-209ENST00000452724 SLC35G6P0C7Q6 338 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 PMCHP20382 165 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 GABRR2P28476 465 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 RGS6P49758 472 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 OR12D2P58182 307 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 MTPNP58546 118 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 SLC35A1P78382 337 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 MLIPQ5VWP3 458 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 ULK3Q6PHR2 472 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 USP50Q70EL3 339 aaPredicted RBP1.78□□□□□ -2.12
USP40-209ENST00000452724 OTUD6AQ7L8S5 288 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 LRRC8AQ8IWT6 810 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 SLC7A5P1Q8MH63 180 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 PROKR2Q8NFJ6 384 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 OR2M7Q8NG81 312 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 ZNF420Q8TAQ5 688 aaPredicted RBP1.78□□□□□ -2.12
USP40-209ENST00000452724 PIH1D2Q8WWB5 315 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 YIPF6Q96EC8 236 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 ENPP4Q9Y6X5 453 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 R4GN34 69 aa1.78□□□□□ -2.12
USP40-209ENST00000452724 C2orf16Q68DN1 1984 aa1.78□□□□□ -2.13
USP40-209ENST00000452724 TRAV8-4A0A0B4J246 113 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 IZUMO1RA6ND01 250 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 AKR7A2O43488 359 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 PTTG1O95997 202 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 GCGP01275 180 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 P01737 135 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 CLDN8P56748 225 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 ATP5G2Q06055 141 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 MEF2CQ06413 473 aaPredicted RBP1.77□□□□□ -2.13
USP40-209ENST00000452724 TRDNQ13061 729 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 PIP5KL1Q5T9C9 394 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 HCP5Q6MZN7 132 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 MRPL21Q7Z2W9 205 aaKnown RBP1.77□□□□□ -2.13
USP40-209ENST00000452724 TMCO2Q7Z6W1 182 aaPredicted RBP1.77□□□□□ -2.13
USP40-209ENST00000452724 ZCCHC24Q8N2G6 241 aaKnown RBP1.77□□□□□ -2.13
USP40-209ENST00000452724 CYB561A3Q8NBI2 242 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 OR4C13Q8NGP0 309 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 ZCCHC13Q8WW36 166 aaKnown RBP1.77□□□□□ -2.13
USP40-209ENST00000452724 TMEM234Q8WY98 164 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 ING5Q8WYH8 240 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 YIPF5Q969M3 257 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 CERS2Q96G23 380 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 DERL3Q96Q80 235 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 API5Q9BZZ5 524 aaKnown RBP1.77□□□□□ -2.13
USP40-209ENST00000452724 INIPQ9NRY2 104 aa1.77□□□□□ -2.13
USP40-209ENST00000452724 BRCA1P38398 1863 aaKnown RBP1.77□□□□□ -2.13
USP40-209ENST00000452724 NPHP4O75161 1426 aaPredicted RBP1.76□□□□□ -2.13
USP40-209ENST00000452724 LOXHD1Q8IVV2 1947 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 WDR19Q8NEZ3 1342 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 A0A1B0GTQ1 180 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 DFFAO00273 331 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 KCNK2O95069 426 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 SMC2O95347 1197 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 KLK1P06870 262 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 OR5AC1P0C628 307 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 STAG3L3P0CL85 134 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 ACOT2P49753 483 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 PSMD4P55036 377 aaKnown RBP1.76□□□□□ -2.13
USP40-209ENST00000452724 LCN2P80188 198 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 C2orf54Q08AI8 447 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 KRTAP6-3Q3LI67 103 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 HIKESHIQ53FT3 197 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 TRMT10CQ7L0Y3 403 aaKnown RBP1.76□□□□□ -2.13
USP40-209ENST00000452724 FA2HQ7L5A8 372 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 CNPY4Q8N129 248 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 OR4D6Q8NGJ1 314 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 AGR3Q8TD06 166 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 OR8D1Q8WZ84 308 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 GABRG3Q99928 467 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 ZNF649Q9BS31 505 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 OR2S2Q9NQN1 319 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 ASF1BQ9NVP2 202 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 RHBDD3Q9Y3P4 386 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 KLF12Q9Y4X4 402 aa1.76□□□□□ -2.13
USP40-209ENST00000452724 CACNA1DQ01668 2161 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 ELP1O95163 1332 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 IGHV2OR16-5A0A0B4J2B6 119 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 NCF1BA6NI72 391 aaPredicted RBP1.75□□□□□ -2.13
USP40-209ENST00000452724 CENPXA8MT69 81 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 NCF1CA8MVU1 366 aaPredicted RBP1.75□□□□□ -2.13
USP40-209ENST00000452724 J3QT63 122 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 ZNF701M0R085 212 aaPredicted RBP1.75□□□□□ -2.13
USP40-209ENST00000452724 RALBP11234 206 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 HLA-GP17693 338 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 TUBG1P23258 451 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 FBXL19-AS1Q494R0 122 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 MRPL2Q5T653 305 aaKnown RBP1.75□□□□□ -2.13
USP40-209ENST00000452724 THOC7Q6I9Y2 204 aaKnown RBP1.75□□□□□ -2.13
USP40-209ENST00000452724 OR2W3Q7Z3T1 314 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 ITPRIPQ8IWB1 547 aa1.75□□□□□ -2.13
USP40-209ENST00000452724 ZFP62Q8NB50 900 aaPredicted RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms