RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CLEC2DQ9UHP7 191 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 HHLA2Q9UM44 414 aa16.67■□□□□ 0.26
COL9A3-202ENST00000452372 TRAV38-1A0A0B4J264 116 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 SRRM5B3KS81 715 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 C3orf80F5H4A9 247 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 TNFRSF13BO14836 293 aaPredicted RBP16.66■□□□□ 0.26
COL9A3-202ENST00000452372 FOXH1O75593 365 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 SERPINA3P01011 423 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 CCDC159P0C7I6 412 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 RPS2P15880 293 aaKnown RBP16.66■□□□□ 0.26
COL9A3-202ENST00000452372 EGR1P18146 543 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 PCMT1P22061 227 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 MYF6P23409 242 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 GTF2A1P52655 376 aaPredicted RBP16.66■□□□□ 0.26
COL9A3-202ENST00000452372 KRTAP24-1Q3LI83 254 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 CCDC58Q4VC31 144 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 OR2G6Q5TZ20 316 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 TEX36Q5VZQ5 186 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 ANKRD60Q9BZ19 345 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 CHST5Q9GZS9 411 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 FKBP14Q9NWM8 211 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 BABAM2Q9NXR7 383 aa16.66■□□□□ 0.26
COL9A3-202ENST00000452372 PQLC2LA1A4F0 135 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 TMEM212A6NML5 194 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 NDUFA2O43678 99 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 GATBO75879 557 aaKnown RBP16.65■□□□□ 0.26
COL9A3-202ENST00000452372 ZFPL1O95159 310 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 ZFP36P26651 326 aaKnown RBP16.65■□□□□ 0.26
COL9A3-202ENST00000452372 SEC61A1P61619 476 aaKnown RBP16.65■□□□□ 0.26
COL9A3-202ENST00000452372 SRSF2Q01130 221 aaKnown RBP16.65■□□□□ 0.26
COL9A3-202ENST00000452372 UBE2V2Q15819 145 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 CR1LQ2VPA4 569 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 RPL22L1Q6P5R6 122 aaKnown RBP16.65■□□□□ 0.26
COL9A3-202ENST00000452372 LYPD2Q6UXB3 125 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 AHSA2Q719I0 299 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 STX19Q8N4C7 294 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 OR51A4Q8NGJ6 313 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 OR10AC1Q8NH08 325 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 OR52N1Q8NH53 320 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 OR5AK2Q8NH90 309 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 PP6455Q8WZ26 134 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 NEIL1Q96FI4 390 aaPredicted RBP16.65■□□□□ 0.26
COL9A3-202ENST00000452372 TECTBQ96PL2 329 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 COMMD4Q9H0A8 199 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 ERVK-18Q9QC07 812 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 SLC7A11Q9UPY5 501 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 LRCH1Q9Y2L9 728 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 POLR3KQ9Y2Y1 108 aaPredicted RBP16.65■□□□□ 0.26
COL9A3-202ENST00000452372 RRP15Q9Y3B9 282 aaKnown RBP16.65■□□□□ 0.26
COL9A3-202ENST00000452372 NBEAL1Q6ZS30 2694 aa16.65■□□□□ 0.26
COL9A3-202ENST00000452372 TRBV2A0A0J9YWF9 115 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 A8MXK9 166 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-202ENST00000452372 MUC1P15941 1255 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-202ENST00000452372 C21orf33P30042 268 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-202ENST00000452372 VHLP40337 213 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 LCN2P80188 198 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 ESCO2Q56NI9 601 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 NLRC3Q7RTR2 1065 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 FAM90A1Q86YD7 464 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 ZNF573Q86YE8 665 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 ZNF485Q8NCK3 441 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 ZNF671Q8TAW3 534 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 GATAD2BQ8WXI9 593 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 AQP3Q92482 292 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 FGGYQ96C11 551 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 ADAT3Q96EY9 351 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-202ENST00000452372 PDCD1LG2Q9BQ51 273 aa16.64■□□□□ 0.25
COL9A3-202ENST00000452372 PPIAL4CA0A0B4J2A2 164 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 SLC1A7O00341 560 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 RHBDL1O75783 438 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 SRD5A1P18405 259 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 HAAOP46952 286 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 CDK5R1Q15078 307 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 MICBQ29980 383 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 XAF1Q6GPH4 301 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 HAGHLQ6PII5 290 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-202ENST00000452372 UTS2BQ765I0 119 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 OR8B3Q8NGG8 313 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 OR13C3Q8NGS6 347 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 RPS4Y2Q8TD47 263 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 C12orf43Q96C57 262 aaKnown RBP16.63■□□□□ 0.25
COL9A3-202ENST00000452372 OR8B2Q96RD0 313 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 SCN3BQ9NY72 215 aa16.63■□□□□ 0.25
COL9A3-202ENST00000452372 IGHV3OR15-7A0A075B7D8 119 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 OGG1O15527 345 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 AKR7A2O43488 359 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 LALBAP00709 142 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 GYPAP02724 150 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 ZNF20P17024 532 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 GATA3P23771 443 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 FUT6P51993 359 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 CNN3Q15417 329 aaKnown RBP16.62■□□□□ 0.25
COL9A3-202ENST00000452372 ZNF841Q6ZN19 808 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 SSBP3Q9BWW4 388 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-202ENST00000452372 WDR13Q9H1Z4 485 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 KAAG1Q9UBP8 84 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 RAB26Q9ULW5 256 aa16.62■□□□□ 0.25
COL9A3-202ENST00000452372 A0A0G2JMP0 313 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 A0A0X1KG70 313 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms