RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ATF1P18846 271 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 RAB3AP20336 220 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 CFHR2P36980 270 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 MTCP1P56278 107 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 GPR50Q13585 617 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 TBCEQ15813 527 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-208ENST00000444533 Q499Y3 187 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 ZNF826PQ6ZT77 177 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 ZNF367Q7RTV3 350 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 PARP16Q8N5Y8 322 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 ZNF485Q8NCK3 441 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 OR10AC1Q8NH08 325 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 RPS4Y2Q8TD47 263 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 FCGR1BQ92637 280 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 OR51I2Q9H344 312 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 PPP1R3EQ9H7J1 279 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 ZNF665Q9H7R5 613 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 ISYNA1Q9NPH2 558 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 MIOXQ9UGB7 285 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 LRRC42Q9Y546 428 aa11.86□□□□□ -0.51
SSBP3-208ENST00000444533 MAP1AP78559 2803 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-208ENST00000444533 PQLC2LA1A4F0 135 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 OOEPA6NGQ2 149 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 B4DSR2 109 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 C3orf80F5H4A9 247 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 LMX1BO60663 402 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 ZNF205O95201 554 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 RPS2P15880 293 aaKnown RBP11.85□□□□□ -0.51
SSBP3-208ENST00000444533 MUC1P15941 1255 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-208ENST00000444533 PCMT1P22061 227 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 GLRA1P23415 457 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 AZGP1P25311 298 aaKnown RBP11.85□□□□□ -0.51
SSBP3-208ENST00000444533 PSMA1P25786 263 aaKnown RBP11.85□□□□□ -0.51
SSBP3-208ENST00000444533 PMELP40967 661 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 IRF3Q14653 427 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 ZMYND11Q15326 602 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 TRAM1Q15629 374 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 UBE2V2Q15819 145 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 ESCO2Q56NI9 601 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 DMRTC1Q5HYR2 192 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 SFRP4Q6FHJ7 346 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-208ENST00000444533 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
SSBP3-208ENST00000444533 DCDC5Q6ZRR9 648 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 WDR86Q86TI4 376 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 MKXQ8IYA7 352 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 LINC01356Q8N9X3 169 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 DEFB108BQ8NET1 73 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 OR8B3Q8NGG8 313 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 OR13C9Q8NGT0 318 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 TMIGD2Q96BF3 282 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 OPALINQ96PE5 141 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 OR5M11Q96RB7 305 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 OR8B2Q96RD0 313 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 PKIBQ9C010 78 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 VCX3AQ9NNX9 186 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 DCAF16Q9NXF7 216 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 RASL12Q9NYN1 266 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 TANC2Q9HCD6 1990 aa11.85□□□□□ -0.51
SSBP3-208ENST00000444533 NKX6-3A6NJ46 265 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 ALX3O95076 343 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 TNFAIP8O95379 198 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 LALBAP00709 142 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 CD80P33681 288 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 GMFBP60983 142 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 MLLT11Q13015 90 aaPredicted RBP11.84□□□□□ -0.51
SSBP3-208ENST00000444533 SMIM21Q3B7S5 101 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 ZNF404Q494X3 552 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 KCTD21Q4G0X4 260 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 FAM166AQ6J272 317 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 Q8IYB0 196 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 PNLDC1Q8NA58 520 aaKnown RBP11.84□□□□□ -0.51
SSBP3-208ENST00000444533 OR51F2Q8NH61 342 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 AQP3Q92482 292 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 SGCDQ92629 289 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 C12orf43Q96C57 262 aaKnown RBP11.84□□□□□ -0.51
SSBP3-208ENST00000444533 GPER1Q99527 375 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 MGLLQ99685 303 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 TMED9Q9BVK6 235 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 LRCH1Q9Y2L9 728 aa11.84□□□□□ -0.51
SSBP3-208ENST00000444533 SIRT4Q9Y6E7 314 aaPredicted RBP11.84□□□□□ -0.51
SSBP3-208ENST00000444533 A0A096LNT2 108 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 SRRM5B3KS81 715 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 ZNF879B4DU55 563 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 TRAPPC2LH3BP13 241 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 AKR7A2O43488 359 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 CD5LO43866 347 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 FOXH1O75593 365 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 NXPH2O95156 264 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 TGFAP01135 160 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 LHBP01229 141 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 IGHV2-5P01817 119 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 IGHV4-31P0DP07 118 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 MAP2K4P45985 399 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 POU3F4P49335 361 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 IL24Q13007 206 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 LIPKQ5VXJ0 399 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 SLC36A1Q7Z2H8 476 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 GLCCI1Q86VQ1 547 aa11.83□□□□□ -0.52
SSBP3-208ENST00000444533 C11orf53Q8IXP5 236 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms