RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 FRAT1Q92837 279 aaPredicted RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 TMEM230Q96A57 120 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 DNAJC19Q96DA6 116 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 SMIM12Q96EX1 92 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 SFRP2Q96HF1 295 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 ZNF414Q96IQ9 312 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 BTF3L4Q96K17 158 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 ZNF597Q96LX8 424 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 C9orf85Q96MD7 179 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 AIF1LQ9BQI0 150 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 ZNF2Q9BSG1 426 aaPredicted RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 CLMPQ9H6B4 373 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 RNF167Q9H6Y7 350 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 UGT1A7Q9HAW7 530 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 IL1RAPQ9NPH3 570 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 ABCC13Q9NSE7 274 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 DEPPQ9NTK1 212 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 MLXQ9UH92 298 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 RAB22AQ9UL26 194 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 LSM5Q9Y4Y9 91 aaKnown RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 CENPVL3A0A0U1RRI6 287 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 CLDN24A6NM45 220 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 CEACAM18A8MTB9 384 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 SHISA9B4DS77 424 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 TSTD3H0UI37 97 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 PHOX2AO14813 284 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 PHYHO14832 338 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 FRAT2O75474 233 aaPredicted RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 SCRG1O75711 98 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 KLF8O95600 359 aaPredicted RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 CST2P09228 141 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 ZNF17P17021 662 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 MYL12AP19105 171 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 GGT1P19440 569 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 AK4P27144 223 aaPredicted RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 MPIP34949 423 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 GPR6P46095 362 aaPredicted RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 RPL5P46777 297 aaKnown RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 TTPAP49638 278 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 UBE2E1P51965 193 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 CRYBA4P53673 196 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 SLC35A1P78382 337 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 OR2F1Q13607 317 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 FAM53BQ14153 422 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 ZNF235Q14590 738 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 CNPY1Q3B7I2 92 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 BRMS1LQ5PSV4 323 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 SYT6Q5T7P8 510 aaPredicted RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 FHL5Q5TD97 284 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 NPSR1Q6W5P4 371 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 ZNF571Q7Z3V5 609 aaPredicted RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 PEX26Q7Z412 305 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 TMEM144Q7Z5S9 345 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 RAB43Q86YS6 212 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 SLC30A8Q8IWU4 369 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 SLC34A3Q8N130 599 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 CLDN22Q8N7P3 220 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 SUMF1Q8NBK3 374 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 ZNRF1Q8ND25 227 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 OR52E4Q8NGH9 312 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 OR51G1Q8NGK1 321 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 OR52N1Q8NH53 320 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 TMEM54Q969K7 222 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 ZHX1-C8orf76Q96EF9 292 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 UBE2E2Q96LR5 201 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 COL21A1Q96P44 957 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 ZIM3Q96PE6 472 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 C20orf144Q9BQM9 153 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 TM2D1Q9BX74 207 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 AMBNQ9NP70 447 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 TMEM9BQ9NQ34 198 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 THAP10Q9P2Z0 257 aaPredicted RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 HHLA2Q9UM44 414 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 NDRG2Q9UN36 371 aaKnown RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 C14orf166Q9Y224 244 aaKnown RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 NDUFAF1Q9Y375 327 aa3.58□□□□□ -1.84
VPS50-206ENST00000443443 ROCK2O75116 1388 aaKnown RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 ZNF646O15015 1829 aaPredicted RBP3.58□□□□□ -1.84
VPS50-206ENST00000443443 IGHV4-30-2A0A087WSY4 118 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 IGHV1OR21-1A0A087WYE8 117 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 NCBP2LA6PVI3 153 aaKnown RBP3.57□□□□□ -1.84
VPS50-206ENST00000443443 ZNF705EA8MWA4 302 aaPredicted RBP3.57□□□□□ -1.84
VPS50-206ENST00000443443 CDX4O14627 284 aaPredicted RBP3.57□□□□□ -1.84
VPS50-206ENST00000443443 KMOO15229 486 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 IGHV3-9P01782 118 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 SEMG1P04279 462 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 ICAM2P13598 275 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 FOLR2P14207 255 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 IGFBP5P24593 272 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 F2RP25116 425 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 PSMB9P28065 219 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 HTR1EP28566 365 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 ADORA2BP29275 332 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 RPL29P47914 159 aaKnown RBP3.57□□□□□ -1.84
VPS50-206ENST00000443443 GABRA4P48169 554 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 P2RY4P51582 365 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 FGF8P55075 233 aaPredicted RBP3.57□□□□□ -1.84
VPS50-206ENST00000443443 NUTF2P61970 127 aaKnown RBP3.57□□□□□ -1.84
VPS50-206ENST00000443443 IL5RAQ01344 420 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms