RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SMIM19Q96E16 107 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
TREX1-201ENST00000433541 NEK6Q9HC98 313 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 FKBP14Q9NWM8 211 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 HIVEP2P31629 2446 aa13.02□□□□□ -0.32
TREX1-201ENST00000433541 IGHV3OR15-7A0A075B7D8 119 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 OOEPA6NGQ2 149 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 CEACAM18A8MTB9 384 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 A8MV72 311 aaPredicted RBP13.02□□□□□ -0.33
TREX1-201ENST00000433541 FAM157AC9JC47 383 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 LGALS8O00214 317 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 MSMBP08118 114 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 CRHBPP24387 322 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 LMO4P61968 165 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 LCN2P80188 198 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 MICBQ29980 383 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 ZNF404Q494X3 552 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 TMEM42Q69YG0 159 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 GCSAMQ8N6F7 178 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 NANOGP1Q8N7R0 232 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 OR8B3Q8NGG8 313 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 OR13C9Q8NGT0 318 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 SGCDQ92629 289 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 OR8B2Q96RD0 313 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 TMEM246Q9BRR3 403 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 FGF23Q9GZV9 251 aaPredicted RBP13.02□□□□□ -0.33
TREX1-201ENST00000433541 OR51I2Q9H344 312 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 PATZ1Q9HBE1 687 aaKnown RBP13.02□□□□□ -0.33
TREX1-201ENST00000433541 PAK1IP1Q9NWT1 392 aaPredicted RBP13.02□□□□□ -0.33
TREX1-201ENST00000433541 MIOXQ9UGB7 285 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 POLDIP2Q9Y2S7 368 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 PCDHGB5Q9Y5G0 923 aa13.02□□□□□ -0.33
TREX1-201ENST00000433541 WNK2Q9Y3S1 2297 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 J3QT63 122 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 RHBDL1O75783 438 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 INMTO95050 263 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 LALBAP00709 142 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 GYPAP02724 150 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 MT-ND2P03891 347 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 HCKP08631 526 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 HSMCR30P0CW71 290 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 EGR1P18146 543 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 CELP19835 753 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 PRKACBP22694 351 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 GLRA1P23415 457 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 FUT6P51993 359 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 ATP1B3P54709 279 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 GNB2P62879 340 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 SLC35A2P78381 396 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 UBE2V2Q15819 145 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 DCDC5Q6ZRR9 648 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 Q6ZSR3 168 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 SERPINA12Q8IW75 414 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 C11orf53Q8IXP5 236 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 OR5D14Q8NGL3 314 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 OR10Z1Q8NGY1 313 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 GHSRQ92847 366 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 CDCA4Q9BXL8 241 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 TLNRD1Q9H1K6 362 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 RASSF4Q9H2L5 321 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 TMEM165Q9HC07 324 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 ZNF281Q9Y2X9 895 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 ARHGAP32A7KAX9 2087 aa13.01□□□□□ -0.33
TREX1-201ENST00000433541 PQLC2LA1A4F0 135 aa13□□□□□ -0.33
TREX1-201ENST00000433541 MAGEB3O15480 346 aa13□□□□□ -0.33
TREX1-201ENST00000433541 OGG1O15527 345 aa13□□□□□ -0.33
TREX1-201ENST00000433541 ADAM20O43506 726 aa13□□□□□ -0.33
TREX1-201ENST00000433541 CYB5AP00167 134 aa13□□□□□ -0.33
TREX1-201ENST00000433541 ATF1P18846 271 aa13□□□□□ -0.33
TREX1-201ENST00000433541 AZGP1P25311 298 aaKnown RBP13□□□□□ -0.33
TREX1-201ENST00000433541 POU3F4P49335 361 aa13□□□□□ -0.33
TREX1-201ENST00000433541 RBP2P50120 134 aa13□□□□□ -0.33
TREX1-201ENST00000433541 MTCP1P56278 107 aa13□□□□□ -0.33
TREX1-201ENST00000433541 KRTAP1-1Q07627 177 aa13□□□□□ -0.33
TREX1-201ENST00000433541 SPHARQ15513 63 aa13□□□□□ -0.33
TREX1-201ENST00000433541 ANGPTL5Q86XS5 388 aa13□□□□□ -0.33
TREX1-201ENST00000433541 BATF2Q8N1L9 274 aa13□□□□□ -0.33
TREX1-201ENST00000433541 AQP3Q92482 292 aa13□□□□□ -0.33
TREX1-201ENST00000433541 TMEM106AQ96A25 262 aa13□□□□□ -0.33
TREX1-201ENST00000433541 TMIGD2Q96BF3 282 aa13□□□□□ -0.33
TREX1-201ENST00000433541 NEIL1Q96FI4 390 aaPredicted RBP13□□□□□ -0.33
TREX1-201ENST00000433541 OPALINQ96PE5 141 aa13□□□□□ -0.33
TREX1-201ENST00000433541 ZCCHC4Q9H5U6 513 aa13□□□□□ -0.33
TREX1-201ENST00000433541 SNTG1Q9NSN8 517 aa13□□□□□ -0.33
TREX1-201ENST00000433541 SIRT4Q9Y6E7 314 aaPredicted RBP13□□□□□ -0.33
TREX1-201ENST00000433541 MTORP42345 2549 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 NKX6-3A6NJ46 265 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 SRRM5B3KS81 715 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 INAFM1C9JVW0 142 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 TMPRSS2O15393 492 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 DENRO43583 198 aaKnown RBP12.99□□□□□ -0.33
TREX1-201ENST00000433541 PLPP2O43688 288 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 FOXH1O75593 365 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 NXPH2O95156 264 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 MUC1P15941 1255 aaPredicted RBP12.99□□□□□ -0.33
TREX1-201ENST00000433541 PCMT1P22061 227 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 PITPNBP48739 271 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 PPP3R1P63098 170 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 FAM76BQ5HYJ3 339 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 DMKNQ6E0U4 476 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms