RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 PARP16Q8N5Y8 322 aa16.84■□□□□ 0.29
CSNK1E-207ENST00000430335 LRRC29Q8WV35 223 aa16.84■□□□□ 0.29
CSNK1E-207ENST00000430335 GHSRQ92847 366 aa16.84■□□□□ 0.29
CSNK1E-207ENST00000430335 PGLYRP3Q96LB9 341 aa16.84■□□□□ 0.29
CSNK1E-207ENST00000430335 ZANQ9Y493 2812 aa16.84■□□□□ 0.29
CSNK1E-207ENST00000430335 SRRM5B3KS81 715 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 LGALS8O00214 317 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 MRPS14O60783 128 aaKnown RBP16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 ZNF205O95201 554 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 ATF1P18846 271 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 ZNF404Q494X3 552 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 SERPINA12Q8IW75 414 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 ZFP41Q8N8Y5 198 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 DNAAF1Q8NEP3 725 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 TSEN15Q8WW01 171 aaKnown RBP16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 OR5M11Q96RB7 305 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 CCDC90BQ9GZT6 254 aa16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 METTL17Q9H7H0 456 aaPredicted RBP16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 TEP1Q99973 2627 aaKnown RBP16.83■□□□□ 0.28
CSNK1E-207ENST00000430335 IGKV1-9A0A0C4DH69 117 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 ALX3O95076 343 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 PRKACBP22694 351 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 EEF1B2P24534 225 aaKnown RBP16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 KCNJ8Q15842 424 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 YIF1BQ5BJH7 314 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 TEX36Q5VZQ5 186 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 HAGHLQ6PII5 290 aaPredicted RBP16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 LINC01356Q8N9X3 169 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 OR5D14Q8NGL3 314 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 ZNF671Q8TAW3 534 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 AQP3Q92482 292 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 SPSB1Q96BD6 273 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 MSI2Q96DH6 328 aaKnown RBP16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 TMEM246Q9BRR3 403 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 ZCCHC4Q9H5U6 513 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 PATZ1Q9HBE1 687 aaKnown RBP16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 MTORP42345 2549 aa16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 ANK3Q12955 4377 aaKnown RBP16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 YLPM1P49750 1951 aaKnown RBP16.82■□□□□ 0.28
CSNK1E-207ENST00000430335 TRAV38-1A0A0B4J264 116 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 TRBV5-5A0A0J9YX44 114 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 OOEPA6NGQ2 149 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 CEACAM18A8MTB9 384 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 B4DSR2 109 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 F5H0A9 414 aaPredicted RBP16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 J3QT63 122 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 CD2P06729 351 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 EGR1P18146 543 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 CELP19835 753 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 MPZP25189 248 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 CD80P33681 288 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 HAAOP46952 286 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 HOXA4Q00056 320 aaPredicted RBP16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 MED22Q15528 200 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 TBCEQ15813 527 aaPredicted RBP16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 BOLLQ8N9W6 283 aaKnown RBP16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 TRMT10AQ8TBZ6 339 aaKnown RBP16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 BORCS8Q96FH0 119 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 NEK6Q9HC98 313 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 ISYNA1Q9NPH2 558 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 MIOXQ9UGB7 285 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 PCDHB10Q9UN67 800 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 TLN2Q9Y4G6 2542 aa16.81■□□□□ 0.28
CSNK1E-207ENST00000430335 FAM230AA0A1W2PPH8 454 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 FAM157AC9JC47 383 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 NDUFA2O43678 99 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 RHBDL1O75783 438 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 OCM2P0CE71 109 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 MUC1P15941 1255 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 AZGP1P25311 298 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 RPS11P62280 158 aaKnown RBP eCLIP16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 GPR50Q13585 617 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 SFRP4Q6FHJ7 346 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 DCDC5Q6ZRR9 648 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 C19orf18Q8NEA5 215 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 OR13C9Q8NGT0 318 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 NPRL2Q8WTW4 380 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 C12orf43Q96C57 262 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 PKIBQ9C010 78 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 POLDIP2Q9Y2S7 368 aa16.8■□□□□ 0.28
CSNK1E-207ENST00000430335 IGKV1-27A0A075B6S5 117 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 PNMA8CA0A1B0GUJ8 204 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 C3orf80F5H4A9 247 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 TNFRSF13BO14836 293 aaPredicted RBP16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 NOS1APO75052 506 aaPredicted RBP16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 ACAA1P09110 424 aaPredicted RBP16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 WNT2P09544 360 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 SOX2P48431 317 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 RBP2P50120 134 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 ATP1B3P54709 279 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 IL24Q13007 206 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 MICBQ29980 383 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 Q499Y3 187 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 ZNF529Q6P280 563 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 LHFPL2Q6ZUX7 228 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 CALHM1Q8IU99 346 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 DEFB108BQ8NET1 73 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 TMEM106AQ96A25 262 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 OPALINQ96PE5 141 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms