RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TMEM131Q92545 1883 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 FAM221AA4D161 298 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF850A8MQ14 1090 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 M0R036 132 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 TLX3O43711 291 aaPredicted RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 TIAF1O95411 115 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 DIRAS3O95661 229 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 TSPAN15O95858 294 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 CST4P01036 141 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 S100A6P06703 90 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 SUMO3P55854 103 aaPredicted RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 TGIF1Q15583 401 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 GGNBP1Q5YKI7 109 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 DTX1Q86Y01 620 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 C20orf196Q8IYI0 205 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 NFAM1Q8NET5 270 aaPredicted RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 FBXO17Q96EF6 278 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 LYZL4Q96KX0 146 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 OXGR1Q96P68 337 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 PRRX2Q99811 253 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 WDR77Q9BQA1 342 aaPredicted RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 FAAP24Q9BTP7 215 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 EIF5A2Q9GZV4 153 aaKnown RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 PNRC2Q9NPJ4 139 aaKnown RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 SMCO4Q9NRQ5 59 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 A0A1W2PNV4 684 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 CEACAM18A8MTB9 384 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 TAAR5O14804 337 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 XRCC2O43543 280 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 PRH1P02810 166 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF806P0C7X5 589 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 SULT1A2P50226 295 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 RAB5BP61020 215 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 KRBOX4Q5JUW0 171 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 TSPO2Q5TGU0 170 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 OR5L2Q8NGL0 311 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 OR6X1Q8NH79 312 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 NANPQ8TBE9 248 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 ISOC2Q96AB3 205 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 BSCL2Q96G97 398 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 OR6C1Q96RD1 312 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 IFT22Q9H7X7 185 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.6□□□□□ -1.355e-7■■■■□ 22.7
SMARCC1-202ENST00000425518 GPR173Q9NS66 373 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 ANAPC10Q9UM13 185 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 COL4A2P08572 1712 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 FAM230AA0A1W2PPH8 454 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 COLCA2A8K830 154 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 ZFAND5O76080 213 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 FCGR3AP08637 254 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 LYL1P12980 280 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 MTCP1P56278 107 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 NXPH1P58417 271 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 IL15RAQ13261 267 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 BTNL8Q6UX41 500 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 FAM89BQ8N5H3 189 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 OR9K2Q8NGE7 335 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 ERGIC1Q969X5 290 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 MYOTQ9UBF9 498 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 NXT1Q9UKK6 140 aaKnown RBP6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 PADI1Q9ULC6 663 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 AMDHD2Q9Y303 409 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 C1orf196B1AJZ1 125 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 G3V3Y1 287 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 SPRY1O43609 319 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 EIF3GO75821 320 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 JTBO76095 146 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 APOC1P02654 83 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 OR5H8P0DN80 308 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 CSNK1A1P48729 337 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 FHITP49789 147 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 DVL1P1P54792 670 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 GRB2P62993 217 aaKnown RBP6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 ABCA11PQ4W5N1 156 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 PHLDA2Q53GA4 152 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 CDCP2Q5VXM1 449 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 SLC16A13Q7RTY0 426 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 SLC25A45Q8N413 288 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 SMRP1Q8NCR6 262 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 REEP6Q96HR9 211 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 JSRP1Q96MG2 331 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 DEFB126Q9BYW3 111 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 PLEK2Q9NYT0 353 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF581Q9P0T4 197 aa6.6□□□□□ -1.35
SMARCC1-202ENST00000425518 SERPINE3A8MV23 424 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 C1QL1O75973 258 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 CD5P06127 495 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 GLB1P16278 677 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 ITGA3P26006 1051 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 MSX1P28360 303 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 ASCL1P50553 236 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 PIGPP57054 158 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 PDCD1Q15116 288 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 MIDNQ504T8 468 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 OR2AE1Q8NHA4 323 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 DYRK2Q92630 601 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 SHDQ96IW2 340 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 PIGQQ9BRB3 760 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 RGCCQ9H4X1 137 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 KCNIP3Q9Y2W7 256 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms