RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 IFNGP01579 166 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 HSD11B1P28845 292 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 PMELP40967 661 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 OMPP47874 163 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 GSK3BP49841 420 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 GRB2P62993 217 aaKnown RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 IL5RAQ01344 420 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 ACSM1Q08AH1 577 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 TSPAN31Q12999 210 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 DCTN2Q13561 401 aaKnown RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 TMEM255AQ5JRV8 349 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 TEX30Q5JUR7 227 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 SAMD4BQ5PRF9 694 aaKnown RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 NCR3LG1Q68D85 454 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 DHRS7BQ6IAN0 325 aaPredicted RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 SLC18B1Q6NT16 456 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 CORO6Q6QEF8 472 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 METAP1DQ6UB28 335 aaPredicted RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 LYPD2Q6UXB3 125 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 SHFQ7M4L6 423 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 LDLRAD3Q86YD5 345 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 LNX2Q8N448 690 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 ZSCAN4Q8NAM6 433 aaPredicted RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 PROKR2Q8NFJ6 384 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 SLC26A10Q8NG04 563 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 OR52H1Q8NGJ2 320 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 OR5D13Q8NGL4 314 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 OR9Q1Q8NGQ5 310 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 OR4K13Q8NH42 304 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 OR52J3Q8NH60 311 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 LINC01006Q8NI28 216 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 ZNF671Q8TAW3 534 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 RCN3Q96D15 328 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 NMNAT3Q96T66 252 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 RBM4BQ9BQ04 359 aaKnown RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 COPS4Q9BT78 406 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 ADAT1Q9BUB4 502 aaKnown RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 MLST8Q9BVC4 326 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 TEX12Q9BXU0 123 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 CHIAQ9BZP6 476 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 OR52D1Q9H346 318 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 GORASP2Q9H8Y8 452 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 WDR76Q9H967 626 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 MARCH7Q9H992 704 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 RPRD1BQ9NQG5 326 aaKnown RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 CENPMQ9NSP4 180 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 DCAF13Q9NV06 445 aaKnown RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 CMTM6Q9NX76 183 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 PPP1R14DQ9NXH3 145 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 NDE1Q9NXR1 346 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 ADA2Q9NZK5 511 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 PDP1Q9P0J1 537 aaPredicted RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 PRPF19Q9UMS4 504 aaKnown RBP4.4□□□□□ -1.71
VPS8-205ENST00000424721 SNX5Q9Y5X3 404 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 LHFPL6Q9Y693 200 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 MGAM2Q2M2H8 2515 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 SVEP1Q4LDE5 3571 aa4.4□□□□□ -1.71
VPS8-205ENST00000424721 IGLV1-36A0A0B4J1U3 117 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 IGHV3-64DA0A0J9YX35 117 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 ZNF816-ZNF321PA0A0X1KG74 233 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 NKX6-3A6NJ46 265 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 TMEM210A6NLX4 147 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 RNASEK-C17orf49H0YIS7 233 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 ZNF593O00488 134 aaPredicted RBP4.39□□□□□ -1.71
VPS8-205ENST00000424721 XPNPEP2O43895 674 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 BAG2O95816 211 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 LHBP01229 141 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 GYPAP02724 150 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 FABP3P05413 133 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 EGR2P11161 476 aaPredicted RBP4.39□□□□□ -1.71
VPS8-205ENST00000424721 HIST1H1CP16403 213 aaKnown RBP4.39□□□□□ -1.71
VPS8-205ENST00000424721 PRDX6P30041 224 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 ERFP50548 548 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 NUDT2P50583 147 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 MNAT1P51948 309 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 UBE2E1P51965 193 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 PSME3P61289 254 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 SPIBQ01892 262 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 ZNF92Q03936 586 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 MPPED2Q15777 294 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 MEP1BQ16820 701 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 RSPO1Q2MKA7 263 aaPredicted RBP4.39□□□□□ -1.71
VPS8-205ENST00000424721 KRTAP27-1Q3LI81 207 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 CLEC12AQ5QGZ9 265 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 FAM201AQ5SY85 155 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 TEX36Q5VZQ5 186 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 ASPHD2Q6ICH7 369 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 PTCHD4Q6ZW05 846 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 PIGWQ7Z7B1 504 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 NAA40Q86UY6 237 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 LINC00346Q8IVM7 164 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 TIGD4Q8IY51 512 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 OR10Z1Q8NGY1 313 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 FAM110DQ8TAY7 271 aaPredicted RBP4.39□□□□□ -1.71
VPS8-205ENST00000424721 FANK1Q8TC84 345 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 C7orf34Q96L11 122 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 TSSK2Q96PF2 358 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 TBX15Q96SF7 602 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 RTL8AQ9BWD3 113 aa4.39□□□□□ -1.71
VPS8-205ENST00000424721 MUC13Q9H3R2 512 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms