RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 TEX47Q8TBZ9 253 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 FBXO17Q96EF6 278 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CENPNQ96H22 339 aaPredicted RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 NMNAT3Q96T66 252 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 NIPSNAP1Q9BPW8 284 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF416Q9BWM5 594 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 BCL2L14Q9BZR8 327 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 OR2H1Q9GZK4 316 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 RACGAP1Q9H0H5 632 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SYT4Q9H2B2 425 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CDH20Q9HBT6 801 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 NOX3Q9HBY0 568 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 EIF3KQ9UBQ5 218 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ENOPH1Q9UHY7 261 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ABCA4P78363 2273 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 NOTCH2Q04721 2471 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 A0A0B4J293 547 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 RIIAD1A6NNX1 92 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 G3V2T6 193 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 H3BN98 237 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 DVL1O14640 695 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SGCEO43556 437 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 IGFBP1P08833 259 aaPredicted RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF823P16415 610 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 PAICSP22234 425 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CPT2P23786 658 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 STOMP27105 288 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 FMO3P31513 532 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ERFP50548 548 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 UCP2P55851 309 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ATP5J2P56134 94 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 LINC01547P58512 204 aaPredicted RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SNRPEP62304 92 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 GABPB1Q06547 395 aaPredicted RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ECH1Q13011 328 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 UBE2V1Q13404 147 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SNTB2Q13425 540 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 AQP6Q13520 282 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 TEX30Q5JUR7 227 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CLEC12AQ5QGZ9 265 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CST9LP1Q5W188 147 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 C11orf71Q6IPW1 123 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ACSM5Q6NUN0 579 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SLC27A4Q6P1M0 643 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ARL9Q6T311 187 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 UGT2A3Q6UWM9 527 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 TGIF2LYQ8IUE0 185 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF584Q8IVC4 421 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SLC37A3Q8NCC5 494 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SLC26A10Q8NG04 563 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 OR2AJ1Q8NGZ0 328 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 OR4Q3Q8NH05 313 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 AKR7LQ8NHP1 331 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 C11orf40Q8WZ69 217 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 POM121L2Q96KW2 1035 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 TSSK2Q96PF2 358 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 DOK1Q99704 481 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 RBM4Q9BWF3 364 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 PLA2G12AQ9BZM1 189 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 NMNAT2Q9BZQ4 307 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 GABARAPL1Q9H0R8 117 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 WNT5BQ9H1J7 359 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 MMP28Q9H239 520 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 FN3KQ9H479 309 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 RERGLQ9H628 205 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ELOVL3Q9HB03 270 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SLC25A19Q9HC21 320 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 RPRD1BQ9NQG5 326 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CMC2Q9NRP2 79 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CA10Q9NS85 328 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 HAO2Q9NYQ3 351 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ATPIF1Q9UII2 106 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 BSNQ9UPA5 3926 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 TMEM129A0AVI4 362 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 H3BSA7 217 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 H7C417 338 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 P2RY10O00398 339 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 DCTN6O00399 190 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 SYNGR3O43761 229 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 MPZL1O95297 269 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 SOX14O95416 240 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 ERCC1P07992 297 aaPredicted RBP2.09□□□□□ -2.07
VPS13A-208ENST00000423463 OR4A8P0C604 315 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF23P17027 643 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF3P17036 446 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 RGS6P49758 472 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 DAPP51397 102 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 EFNA4P52798 201 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 DVL1P1P54792 670 aaPredicted RBP2.09□□□□□ -2.07
VPS13A-208ENST00000423463 SNRPD2P62316 118 aaKnown RBP2.09□□□□□ -2.07
VPS13A-208ENST00000423463 CRMP1Q14194 572 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 PTGES3Q15185 160 aaKnown RBP2.09□□□□□ -2.07
VPS13A-208ENST00000423463 RAB35Q15286 201 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 PCK2Q16822 640 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 CCDC92Q53HC0 331 aaPredicted RBP2.09□□□□□ -2.07
VPS13A-208ENST00000423463 GFI1BQ5VTD9 330 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 KDM4DQ6B0I6 523 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF774Q6NX45 483 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 TEX38Q6PEX7 206 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 MYPOPQ86VE0 399 aaPredicted RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms