RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CHST5Q9GZS9 411 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 TLNRD1Q9H1K6 362 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 PATZ1Q9HBE1 687 aaKnown RBP13.21□□□□□ -0.29
BRAT1-202ENST00000421712 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 MIOXQ9UGB7 285 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 OGG1O15527 345 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 AKR7A2O43488 359 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 RGS10O43665 173 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 GYPAP02724 150 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 MSMBP08118 114 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 EGR1P18146 543 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 SOX2P48431 317 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 FUT6P51993 359 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 TAS2R43P59537 309 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 SLC35A2P78381 396 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 CNN3Q15417 329 aaKnown RBP13.2□□□□□ -0.3
BRAT1-202ENST00000421712 MICBQ29980 383 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 RBM48Q5RL73 367 aaKnown RBP13.2□□□□□ -0.3
BRAT1-202ENST00000421712 NLRC3Q7RTR2 1065 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 GCSAMQ8N6F7 178 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 GPR148Q8TDV2 347 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 SGCDQ92629 289 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 SMIM19Q96E16 107 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 BORCS8Q96FH0 119 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 PAK1IP1Q9NWT1 392 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-202ENST00000421712 BLOC1S6Q9UL45 172 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 PCDHGB5Q9Y5G0 923 aa13.2□□□□□ -0.3
BRAT1-202ENST00000421712 SIRT4Q9Y6E7 314 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-202ENST00000421712 PQLC2LA1A4F0 135 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 INAFM1C9JVW0 142 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 PLPP2O43688 288 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 RHBDL1O75783 438 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 LALBAP00709 142 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 LHBP01229 141 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 ATF1P18846 271 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 GLRA1P23415 457 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 CRHBPP24387 322 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 CFHR2P36980 270 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 LCN2P80188 198 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 MED22Q15528 200 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 ESCO2Q56NI9 601 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 DCDC5Q6ZRR9 648 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 GLCCI1Q86VQ1 547 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 ANGPTL5Q86XS5 388 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 SERPINA12Q8IW75 414 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 OR8B3Q8NGG8 313 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 OR5D14Q8NGL3 314 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 OR10Z1Q8NGY1 313 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 GHSRQ92847 366 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 C1orf159Q96HA4 380 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 OR8B2Q96RD0 313 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 ZCCHC4Q9H5U6 513 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 NEK6Q9HC98 313 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 SNTG1Q9NSN8 517 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 ZNF281Q9Y2X9 895 aa13.19□□□□□ -0.3
BRAT1-202ENST00000421712 MALRD1Q5VYJ5 2156 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 J3QT63 122 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 ADAM20O43506 726 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 DENRO43583 198 aaKnown RBP13.18□□□□□ -0.3
BRAT1-202ENST00000421712 NDUFA2O43678 99 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 FOXH1O75593 365 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 FSTL3O95633 263 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 PLATP00750 562 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 CD2P06729 351 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 WNT2P09544 360 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 CELP19835 753 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 PRKACBP22694 351 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 ATP1B3P54709 279 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 MTCP1P56278 107 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 GNB2P62879 340 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 RNLSQ5VYX0 342 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 DMKNQ6E0U4 476 aaPredicted RBP13.18□□□□□ -0.3
BRAT1-202ENST00000421712 LYPD2Q6UXB3 125 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 UTS2BQ765I0 119 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 ZNF485Q8NCK3 441 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 OR5T2Q8NGG2 359 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 AQP3Q92482 292 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 TMEM186Q96B77 213 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 TMIGD2Q96BF3 282 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 SEH1LQ96EE3 360 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 NEIL1Q96FI4 390 aaPredicted RBP13.18□□□□□ -0.3
BRAT1-202ENST00000421712 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 RASSF4Q9H2L5 321 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 DUSP21Q9H596 190 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 HIF1ANQ9NWT6 349 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 POLDIP2Q9Y2S7 368 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 HIVEP2P31629 2446 aa13.18□□□□□ -0.3
BRAT1-202ENST00000421712 SRRM5B3KS81 715 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 PHF1O43189 567 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-202ENST00000421712 SYNGR1O43759 233 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 INMTO95050 263 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 MT-ND2P03891 347 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 HCKP08631 526 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 HSMCR30P0CW71 290 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 MUC1P15941 1255 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-202ENST00000421712 AZGP1P25311 298 aaKnown RBP13.17□□□□□ -0.3
BRAT1-202ENST00000421712 RBP2P50120 134 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 DVL1P1P54792 670 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-202ENST00000421712 SEC61A1P61619 476 aaKnown RBP13.17□□□□□ -0.3
BRAT1-202ENST00000421712 SPHARQ15513 63 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms