RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 AQP3Q92482 292 aa13.21□□□□□ -0.29
VAT1-202ENST00000420567 TECTBQ96PL2 329 aa13.21□□□□□ -0.29
VAT1-202ENST00000420567 MYCBPQ99417 103 aaPredicted RBP13.21□□□□□ -0.29
VAT1-202ENST00000420567 CCL13Q99616 98 aa13.21□□□□□ -0.29
VAT1-202ENST00000420567 RASSF4Q9H2L5 321 aa13.21□□□□□ -0.29
VAT1-202ENST00000420567 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
VAT1-202ENST00000420567 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.29
VAT1-202ENST00000420567 DUX4Q9UBX2 424 aa13.21□□□□□ -0.29
VAT1-202ENST00000420567 OPN4Q9UHM6 478 aa13.21□□□□□ -0.29
VAT1-202ENST00000420567 POLR3KQ9Y2Y1 108 aaPredicted RBP13.21□□□□□ -0.29
VAT1-202ENST00000420567 INSIG2Q9Y5U4 225 aa13.21□□□□□ -0.29
VAT1-202ENST00000420567 NIPBLQ6KC79 2804 aaeCLIP13.2□□□□□ -0.3
VAT1-202ENST00000420567 PPIAL4CA0A0B4J2A2 164 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 FAM230AA0A1W2PPH8 454 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 PQLC2LA1A4F0 135 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 H0YHG0 523 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 TFF1P04155 84 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 MUC1P15941 1255 aaPredicted RBP13.2□□□□□ -0.3
VAT1-202ENST00000420567 CFHR2P36980 270 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 HAAOP46952 286 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 ETV1P50549 477 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 CCR9P51686 369 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 AQP4P55087 323 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 TMEM244Q5VVB8 128 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 BATF2Q8N1L9 274 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 FAM216BQ8N7L0 139 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 ZNF676Q8N7Q3 588 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 OR5T2Q8NGG2 359 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 ADAT3Q96EY9 351 aaPredicted RBP13.2□□□□□ -0.3
VAT1-202ENST00000420567 ZNF488Q96MN9 340 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 JAM3Q9BX67 310 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 CHST5Q9GZS9 411 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 ERVK-18Q9QC07 812 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 HSPE1-MOB4S4R3N1 261 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 MALRD1Q5VYJ5 2156 aa13.2□□□□□ -0.3
VAT1-202ENST00000420567 IGHV2-70DA0A0C4DH43 119 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 IRGMA1A4Y4 181 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 OR4C45A6NMZ5 311 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 C22orf46C9J442 243 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 TMPRSS2O15393 492 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 NDUFA2O43678 99 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 SYNGR1O43759 233 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 GLRA1P23415 457 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 DCKP27707 260 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 GTF2A1P52655 376 aaPredicted RBP13.19□□□□□ -0.3
VAT1-202ENST00000420567 GBX2P52951 348 aaPredicted RBP13.19□□□□□ -0.3
VAT1-202ENST00000420567 PAX2Q02962 417 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 UBE2V2Q15819 145 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 OR2G6Q5TZ20 316 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 STUMQ69YW2 141 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 C1QL2Q7Z5L3 287 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 FGFRL1Q8N441 504 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 CCDC54Q8NEL0 328 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 OR51A4Q8NGJ6 313 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 TFAP2CQ92754 450 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 GGHQ92820 318 aa13.19□□□□□ -0.3
VAT1-202ENST00000420567 DIMT1Q9UNQ2 313 aaKnown RBP13.19□□□□□ -0.3
VAT1-202ENST00000420567 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.19□□□□□ -0.31e-7■□□□□ 9.8
VAT1-202ENST00000420567 J3QT63 122 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 DVL1O14640 695 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 XPNPEP2O43895 674 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 FCN3O75636 299 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 GATBO75879 557 aaKnown RBP13.18□□□□□ -0.3
VAT1-202ENST00000420567 ISG15P05161 165 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 ZNF20P17024 532 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 AMY2BP19961 511 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 SRSF2Q01130 221 aaKnown RBP13.18□□□□□ -0.3
VAT1-202ENST00000420567 IKZF1Q13422 519 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 ANGPTL5Q86XS5 388 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 ZNF573Q86YE8 665 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 CALHM1Q8IU99 346 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 OR13C3Q8NGS6 347 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 ZNF671Q8TAW3 534 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 RAB40AQ8WXH6 277 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 ST8SIA4Q92187 359 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 DACT3Q96B18 629 aaPredicted RBP13.18□□□□□ -0.3
VAT1-202ENST00000420567 FGGYQ96C11 551 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 C12orf43Q96C57 262 aaKnown RBP13.18□□□□□ -0.3
VAT1-202ENST00000420567 TMEM80Q96HE8 168 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 NUDT16L1Q9BRJ7 211 aaKnown RBP13.18□□□□□ -0.3
VAT1-202ENST00000420567 MRI1Q9BV20 369 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 NLKQ9UBE8 527 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 CLEC2DQ9UHP7 191 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 METRNQ9UJH8 293 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 HHLA2Q9UM44 414 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 SLC7A11Q9UPY5 501 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 EXOSC1Q9Y3B2 195 aaKnown RBP13.18□□□□□ -0.3
VAT1-202ENST00000420567 AUP1Q9Y679 476 aa13.18□□□□□ -0.3
VAT1-202ENST00000420567 NKX6-3A6NJ46 265 aa13.17□□□□□ -0.3
VAT1-202ENST00000420567 ZFPL1O95159 310 aa13.17□□□□□ -0.3
VAT1-202ENST00000420567 PLATP00750 562 aa13.17□□□□□ -0.3
VAT1-202ENST00000420567 SERPINA3P01011 423 aa13.17□□□□□ -0.3
VAT1-202ENST00000420567 SELLP14151 372 aa13.17□□□□□ -0.3
VAT1-202ENST00000420567 MYL12AP19105 171 aa13.17□□□□□ -0.3
VAT1-202ENST00000420567 NPY4RP50391 375 aa13.17□□□□□ -0.3
VAT1-202ENST00000420567 MRPL28Q13084 256 aaKnown RBP13.17□□□□□ -0.3
VAT1-202ENST00000420567 CNN3Q15417 329 aaKnown RBP13.17□□□□□ -0.3
VAT1-202ENST00000420567 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms