RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 SFRP4Q6FHJ7 346 aaPredicted RBP10.45□□□□□ -0.74
SKA1-203ENST00000417656 HAGHLQ6PII5 290 aaPredicted RBP10.45□□□□□ -0.74
SKA1-203ENST00000417656 NANOGP1Q8N7R0 232 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 LINC01356Q8N9X3 169 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 PP6455Q8WZ26 134 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 FGGYQ96C11 551 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 C10orf35Q96D05 121 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 SMIM19Q96E16 107 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 C1orf159Q96HA4 380 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 TMEM246Q9BRR3 403 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 Q9H521 79 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 PATZ1Q9HBE1 687 aaKnown RBP10.45□□□□□ -0.74
SKA1-203ENST00000417656 TMEM165Q9HC07 324 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 PCDHB10Q9UN67 800 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 DHDHQ9UQ10 334 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 ERGIC3Q9Y282 383 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 MTORP42345 2549 aa10.45□□□□□ -0.74
SKA1-203ENST00000417656 MALRD1Q5VYJ5 2156 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 FAM230AA0A1W2PPH8 454 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 OOEPA6NGQ2 149 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 SRRM5B3KS81 715 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 INAFM1C9JVW0 142 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 F5H0A9 414 aaPredicted RBP10.44□□□□□ -0.74
SKA1-203ENST00000417656 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.44□□□□□ -0.74
SKA1-203ENST00000417656 J3QT63 122 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 OGG1O15527 345 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 AKR7A2O43488 359 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 RGS10O43665 173 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 TGFAP01135 160 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 LHBP01229 141 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 MSMBP08118 114 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 HAAOP46952 286 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 SOX2P48431 317 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 TAS2R43P59537 309 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 IRF3Q14653 427 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 CNN3Q15417 329 aaKnown RBP10.44□□□□□ -0.74
SKA1-203ENST00000417656 DMKNQ6E0U4 476 aaPredicted RBP10.44□□□□□ -0.74
SKA1-203ENST00000417656 FAM166AQ6J272 317 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 OR13C5Q8NGS8 318 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 OR13C9Q8NGT0 318 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 OR10Z1Q8NGY1 313 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 AQP3Q92482 292 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 SEH1LQ96EE3 360 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 TECTBQ96PL2 329 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 MND1Q9BWT6 205 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 CDCA4Q9BXL8 241 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 DUSP21Q9H596 190 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 SLC7A11Q9UPY5 501 aa10.44□□□□□ -0.74
SKA1-203ENST00000417656 NSD1Q96L73 2696 aaPredicted RBP10.43□□□□□ -0.74
SKA1-203ENST00000417656 IGKV1-27A0A075B6S5 117 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 IGKV1-9A0A0C4DH69 117 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 A8MV72 311 aaPredicted RBP10.43□□□□□ -0.74
SKA1-203ENST00000417656 B4DSR2 109 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 DENRO43583 198 aaKnown RBP10.43□□□□□ -0.74
SKA1-203ENST00000417656 SYNGR1O43759 233 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 FSTL3O95633 263 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 PLATP00750 562 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 SERPINA3P01011 423 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 ATF1P18846 271 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 AZGP1P25311 298 aaKnown RBP10.43□□□□□ -0.74
SKA1-203ENST00000417656 RBM48Q5RL73 367 aaKnown RBP10.43□□□□□ -0.74
SKA1-203ENST00000417656 RNLSQ5VYX0 342 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 TEX36Q5VZQ5 186 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 LYPD2Q6UXB3 125 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 DCDC5Q6ZRR9 648 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 UTS2BQ765I0 119 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 FAM90A1Q86YD7 464 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 ZNF573Q86YE8 665 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 CALHM1Q8IU99 346 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 BATF2Q8N1L9 274 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 OR51F2Q8NH61 342 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 PGLYRP3Q96LB9 341 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 ZNF488Q96MN9 340 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 OR5M11Q96RB7 305 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 CCDC90BQ9GZT6 254 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 WDR13Q9H1Z4 485 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 BLOC1S6Q9UL45 172 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 KCNS2Q9ULS6 477 aa10.43□□□□□ -0.74
SKA1-203ENST00000417656 LSM2Q9Y333 95 aaKnown RBP10.43□□□□□ -0.74
SKA1-203ENST00000417656 TRAV38-1A0A0B4J264 116 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 PLPP2O43688 288 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 GYPAP02724 150 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 RPSAP08865 295 aaKnown RBP10.42□□□□□ -0.74
SKA1-203ENST00000417656 CFHR2P36980 270 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 DVL1P1P54792 670 aaPredicted RBP10.42□□□□□ -0.74
SKA1-203ENST00000417656 LCN2P80188 198 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 MED22Q15528 200 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 ESCO2Q56NI9 601 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 GLCCI1Q86VQ1 547 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 ANGPTL5Q86XS5 388 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 OR8B3Q8NGG8 313 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 GPR148Q8TDV2 347 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 GHSRQ92847 366 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 BORCS8Q96FH0 119 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 NEIL1Q96FI4 390 aaPredicted RBP10.42□□□□□ -0.74
SKA1-203ENST00000417656 OPALINQ96PE5 141 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 OR8B2Q96RD0 313 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 SNTG1Q9NSN8 517 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 TAS2R4Q9NYW5 299 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 CTSZQ9UBR2 303 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms