RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 CLEC2LP0C7M8 214 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 MTNR1BP49286 362 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 HNRNPA0Q13151 305 aaKnown RBP17.22■□□□□ 0.35
PTPRU-203ENST00000415600 PCK2Q16822 640 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 TEX30Q5JUR7 227 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 YIPF7Q8N8F6 280 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 SEMA6DQ8NFY4 1073 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 OR8B4Q96RC9 309 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 MRI1Q9BV20 369 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 C1QTNF5Q9BXJ0 243 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 SMURF1Q9HCE7 757 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 GCM1Q9NP62 436 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 CYB5R1Q9UHQ9 305 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 IKZF2Q9UKS7 526 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 DYSFO75923 2080 aa17.22■□□□□ 0.35
PTPRU-203ENST00000415600 TMEM178BH3BS89 294 aa17.21■□□□□ 0.35
PTPRU-203ENST00000415600 PSMD9O00233 223 aa17.21■□□□□ 0.35
PTPRU-203ENST00000415600 SPARCP09486 303 aa17.21■□□□□ 0.35
PTPRU-203ENST00000415600 RPS27P42677 84 aaKnown RBP17.21■□□□□ 0.35
PTPRU-203ENST00000415600 MMP16P51512 607 aa17.21■□□□□ 0.35
PTPRU-203ENST00000415600 SPRNQ5BIV9 151 aa17.21■□□□□ 0.35
PTPRU-203ENST00000415600 C1orf229Q6ZS94 237 aaPredicted RBP17.21■□□□□ 0.35
PTPRU-203ENST00000415600 LINC00346Q8IVM7 164 aa17.21■□□□□ 0.35
PTPRU-203ENST00000415600 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.21■□□□□ 0.35
PTPRU-203ENST00000415600 MEGF10Q96KG7 1140 aa17.21■□□□□ 0.35
PTPRU-203ENST00000415600 SLC30A2Q9BRI3 323 aa17.21■□□□□ 0.35
PTPRU-203ENST00000415600 SLC22A4Q9H015 551 aa17.21■□□□□ 0.35
PTPRU-203ENST00000415600 POLR3KQ9Y2Y1 108 aaPredicted RBP17.21■□□□□ 0.35
PTPRU-203ENST00000415600 SHISA3A0PJX4 238 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 J3QRK9 145 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 AVPP01185 164 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 LCATP04180 440 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 ADRA2CP18825 462 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 ROM1Q03395 351 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 ZMYND11Q15326 602 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 ACSM3Q53FZ2 586 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 BHLHE23Q8NDY6 225 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 OR10AD1Q8NGE0 317 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 FAM216AQ8WUB2 273 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 ERGIC1Q969X5 290 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 AMELYQ99218 206 aa17.2■□□□□ 0.34
PTPRU-203ENST00000415600 GATBO75879 557 aaKnown RBP17.19■□□□□ 0.34
PTPRU-203ENST00000415600 ACSM4P0C7M7 580 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 ETV6P41212 452 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 SLC6A9P48067 706 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 NANOS3P60323 173 aaKnown RBP17.19■□□□□ 0.34
PTPRU-203ENST00000415600 RPS11P62280 158 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTPRU-203ENST00000415600 ALKBH1Q13686 389 aaKnown RBP17.19■□□□□ 0.34
PTPRU-203ENST00000415600 ZNF181Q2M3W8 571 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 KCTD18Q6PI47 426 aaPredicted RBP17.19■□□□□ 0.34
PTPRU-203ENST00000415600 COLCA1Q6ZS62 124 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 PGAP1Q75T13 922 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 NLRC3Q7RTR2 1065 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 MRPL21Q7Z2W9 205 aaKnown RBP17.19■□□□□ 0.34
PTPRU-203ENST00000415600 CEACAM19Q7Z692 300 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 ZNF679Q8IYX0 411 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 CELF2-AS1Q8N7Q2 184 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 GCDHQ92947 438 aaPredicted RBP17.19■□□□□ 0.34
PTPRU-203ENST00000415600 DCAF16Q9NXF7 216 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 MIOXQ9UGB7 285 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 AUP1Q9Y679 476 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 ZNF45Q02386 682 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 EIF2B1Q14232 305 aaKnown RBP17.19■□□□□ 0.34
PTPRU-203ENST00000415600 FDX2Q6P4F2 183 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 BTNL3Q6UXE8 466 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 CFAP77Q6ZQR2 320 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 TPRA1Q86W33 373 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 OR11L1Q8NGX0 322 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 PHYHIPQ92561 330 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 AP3S1Q92572 193 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 PDCD1LG2Q9BQ51 273 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 ABHD6Q9BV23 337 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 ZNF281Q9Y2X9 895 aa17.19■□□□□ 0.34
PTPRU-203ENST00000415600 ANK2Q01484 3957 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 A8MXK9 166 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 M0R135 149 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 CTDSP2O14595 271 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 RPP14O95059 124 aaKnown RBP17.18■□□□□ 0.34
PTPRU-203ENST00000415600 FSTL3O95633 263 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 RPS2P15880 293 aaKnown RBP17.18■□□□□ 0.34
PTPRU-203ENST00000415600 CFL1P23528 166 aaKnown RBP17.18■□□□□ 0.34
PTPRU-203ENST00000415600 MYL9P24844 172 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 ZFP36P26651 326 aaKnown RBP17.18■□□□□ 0.34
PTPRU-203ENST00000415600 CALRP27797 417 aaKnown RBP17.18■□□□□ 0.34
PTPRU-203ENST00000415600 CD40LGP29965 261 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 ZNF154Q13106 437 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 KRTAP27-1Q3LI81 207 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 YIF1BQ5BJH7 314 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 C16orf87Q6PH81 154 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 UNQ9370/PRO34162Q6UXP9 181 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 OR13C5Q8NGS8 318 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 ZNF799Q96GE5 643 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 MAP6Q96JE9 813 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 WDFY2Q96P53 400 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 SLC6A7Q99884 636 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 MROQ9BYG7 248 aa17.18■□□□□ 0.34
PTPRU-203ENST00000415600 DDX28Q9NUL7 540 aaKnown RBP17.18■□□□□ 0.34
PTPRU-203ENST00000415600 PPP5CP53041 499 aa17.17■□□□□ 0.34
PTPRU-203ENST00000415600 GK2Q14410 553 aaPredicted RBP17.17■□□□□ 0.34
PTPRU-203ENST00000415600 TAF13Q15543 124 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms