RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ZNF840PA6NDX5 716 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 A8MUA0 341 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 F5H5T6 163 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 H3BN98 237 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 M0QXV9 152 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 M0QZ92 97 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 RAB29O14966 203 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 CDK2AP2O75956 126 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 B3GAT3O94766 335 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR2A4O95047 310 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 NXPH2O95156 264 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC25A14O95258 325 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 IFNA4P05014 189 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ACSM4P0C7M7 580 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZDHHC11BP0C7U3 371 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SMIM10L1P0DMW3 83 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SMIM10L2AP0DMW4 78 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SMIM10L2BP0DMW5 78 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ATP1B2P14415 290 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 HMGA1P17096 107 aaKnown RBP3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 IDSP22304 550 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 NFYAP23511 347 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 MMP11P24347 488 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 CCR7P32248 378 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 MAS1LP35410 378 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 AQP2P41181 271 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SOX3P41225 446 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 PLXNA3P51805 1871 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 CRISP3P54108 245 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 PSMD4P55036 377 aaKnown RBP3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 UCNP55089 124 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 CLDN15P56746 228 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 PLP1P60201 277 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ERVK-25P63136 954 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 FKBP1BP68106 108 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF763Q0D2J5 394 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF638Q14966 1978 aaKnown RBP3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZSWIM7Q19AV6 140 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 GSG1Q2KHT4 349 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ODF4Q2M2E3 257 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 LGALSLQ3ZCW2 172 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 PHLDA2Q53GA4 152 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SYT14P1Q58G82 188 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 PABPC1L2AQ5JQF8 200 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF57Q68EA5 555 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 C22orf42Q6IC83 251 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC8B1Q6J4K2 584 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 MFSD12Q6NUT3 480 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ANKRD12Q6UB98 2062 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF841Q6ZN19 808 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF546Q86UE3 836 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMEM17Q86X19 198 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF100Q8IYN0 542 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 CMTM8Q8IZV2 173 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 C10orf111Q8N326 155 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 TOMM5Q8N4H5 51 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 MS4A15Q8N5U1 240 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMEM156Q8N614 296 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR7G2Q8NG99 324 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR52I1Q8NGK6 324 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR1L6Q8NGR2 347 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR52P1PQ8NH57 321 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 NEIL3Q8TAT5 605 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 GNPDA2Q8TDQ7 276 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 FAM222BQ8WU58 562 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 DNAJB3Q8WWF6 145 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 MOB3AQ96BX8 217 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 PELI1Q96FA3 418 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SMIM10Q96HG1 83 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 C18orf12Q96KH6 178 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 AMDHD1Q96NU7 426 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 RBP7Q96R05 134 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR2A7Q96R45 310 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 EFCAB11Q9BUY7 163 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 GPR174Q9BXC1 333 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 MAP1LC3CQ9BXW4 147 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 REG4Q9BYZ8 158 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 C1orf198Q9H425 327 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 C11orf49Q9H6J7 331 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 CDH20Q9HBT6 801 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 AMBNQ9NP70 447 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 NANSQ9NR45 359 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 C19orf12Q9NSK7 152 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SDHAF2Q9NX18 166 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 MED11Q9P086 117 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 NXT1Q9UKK6 140 aaKnown RBP3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 SCN8AQ9UQD0 1980 aa3.06□□□□□ -1.92
HMGB3P23-201ENST00000414981 PTPRDP23468 1912 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 WDR90Q96KV7 1748 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 A0A0D9SG52 128 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 ARL5CA6NH57 179 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF98A6NK75 572 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 D6RAR5 112 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 H7C2Y5 167 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 GABRPO00591 440 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 CCL22O00626 93 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR1I1O60431 355 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 GALR3O60755 368 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 HPGDSO60760 199 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms