RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 HEXAP06865 529 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 NME1P15531 152 aaKnown RBP12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 RBMXP38159 391 aaKnown RBP12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 DVL1P1P54792 670 aaPredicted RBP12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 KIAA0895LQ68EN5 471 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 PLXDC2Q6UX71 529 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 CPEB2Q7Z5Q1 589 aaKnown RBP12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 OR11L1Q8NGX0 322 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 OR5B2Q96R09 309 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 CCDC85CA6NKD9 419 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 LY86O95711 162 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 PRH1P02810 166 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 S100A9P06702 114 aaKnown RBP12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 SPINK2P20155 84 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 THBS4P35443 961 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 RNF4P78317 190 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 CCL20P78556 96 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 GUK1Q16774 197 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 ZNF529Q6P280 563 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 Q7L0L9 218 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 PEG10Q86TG7 708 aaKnown RBP12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 ARRDC1Q8N5I2 433 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 OR9K2Q8NGE7 335 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 ZNF285Q96NJ3 590 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 NKX2-4Q9H2Z4 354 aa12.8□□□□□ -0.36
SEMA3F-202ENST00000413852 A6NIZ1 184 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 LIPT2A6NK58 231 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 IFNA2P01563 188 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 QDPRP09417 244 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 TMEM225BP0DP42 221 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 RAP1BP61224 184 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 RAP1AP62834 184 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 PDZD11Q5EBL8 140 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 LINC00469Q8N7U9 141 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 SUMF1Q8NBK3 374 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 OR6S1Q8NH40 331 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 SLAMF9Q96A28 289 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 SAT2Q96F10 170 aaPredicted RBP12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 PRRX2Q99811 253 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 KLRF1Q9NZS2 232 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 URGCP-MRPS24S4R325 110 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 MBPP02686 304 aaPredicted RBP12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 CHRM2P08172 466 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 JMJD7P0C870 316 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 LYL1P12980 280 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 GABREP78334 506 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 SMAD4Q13485 552 aaKnown RBP12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 OR5L1Q8NGL2 311 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 FNDC9Q8TBE3 224 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 SHDQ96IW2 340 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 CLEC1BQ9P126 229 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 TIMM10BQ9Y5J6 103 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 UMAD1C9J7I0 102 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 CST4P01036 141 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 GSTP1P09211 210 aaKnown RBP12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 OMGP23515 440 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 TAF9Q16594 264 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 ZNF343Q6P1L6 599 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 OGFOD3Q6PK18 319 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 TMEM182Q6ZP80 229 aaPredicted RBP12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 OR2AE1Q8NHA4 323 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 PHOSPHO2Q8TCD6 241 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 MARS2Q96GW9 593 aaKnown RBP12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 OCSTAMPQ9BR26 566 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 ZDHHC8Q9ULC8 765 aa12.79□□□□□ -0.36
SEMA3F-202ENST00000413852 A0A1W2PQD3 144 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 CDRT15L2A8MXV6 281 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 H3BMH7 237 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 CAMLGP49069 296 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 SLC38A9Q8NBW4 561 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 OR56B1Q8NGI3 324 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 WDR77Q9BQA1 342 aaPredicted RBP12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 C14orf166Q9Y224 244 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 TLCD2A6NGC4 264 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 TNFSF12O43508 249 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 EIF1BO60739 113 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 OR5AC1P0C628 307 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 RAB5AP20339 215 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 SNCAP37840 140 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 PLA2G5P39877 138 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 EIF1P41567 113 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 HSD11B2P80365 405 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 SULF2Q8IWU5 870 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 SKA3Q8IX90 412 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 PGAM5Q96HS1 289 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 PNRC2Q9NPJ4 139 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 GPR173Q9NS66 373 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 WNT16Q9UBV4 365 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 TINAGQ9UJW2 476 aa12.78□□□□□ -0.36
SEMA3F-202ENST00000413852 UBE2CO00762 179 aa12.77□□□□□ -0.36
SEMA3F-202ENST00000413852 DEDDO75618 318 aa12.77□□□□□ -0.36
SEMA3F-202ENST00000413852 PIGPP57054 158 aa12.77□□□□□ -0.36
SEMA3F-202ENST00000413852 PHYHD1Q5SRE7 291 aa12.77□□□□□ -0.36
SEMA3F-202ENST00000413852 PRAMEF20Q5VT98 475 aa12.77□□□□□ -0.36
SEMA3F-202ENST00000413852 C15orf54Q8N8G6 183 aa12.77□□□□□ -0.36
SEMA3F-202ENST00000413852 FAM213BQ8TBF2 198 aa12.77□□□□□ -0.36
SEMA3F-202ENST00000413852 TCEAL3Q969E4 200 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms