RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 BATF2Q8N1L9 274 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 AMER3Q8N944 861 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 RDH5Q92781 318 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 TMEM9BQ9NQ34 198 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 KIF13BQ9NQT8 1826 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 IGHV3-15A0A0B4J1V0 119 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 GUCA2AQ02747 115 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 DHRS11Q6UWP2 260 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 C4orf45Q96LM5 186 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 DCAF16Q9NXF7 216 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 LOC102723971A0A1B0GUV8 181 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 CST4P01036 141 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 SLC25A26Q70HW3 274 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 SCCPDHQ8NBX0 429 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 TMEM218A2RU14 115 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 AQP7P3A6NL99 342 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 BMPR1BO00238 502 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 B4GALT1P15291 398 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 PI3P19957 117 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 HAAOP46952 286 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 C9orf62Q8N4C0 152 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 FOXQ1Q9C009 403 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 SERGEFQ9UGK8 458 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 CD160O95971 181 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 CCL7P80098 99 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.448e-8■■■□□ 15.5
SMARCA4-202ENST00000413806 SPANXN5Q5MJ07 72 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 OR1F12Q8NHA8 337 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 APOBEC3DQ96AK3 386 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 GSX1Q9H4S2 264 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 FOCADQ5VW36 1801 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 TMEM272A0A1B0GTI8 110 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 PIAS2O75928 621 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 TAS2R45P59539 299 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 UQCC1Q9NVA1 299 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 MTFP1Q9UDX5 166 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 A0A096LPE4 126 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 A0A1W2PPZ6 126 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 COX5AP20674 150 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 OR2B11Q5JQS5 317 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 TSPAN32Q96QS1 320 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 TRIB1Q96RU8 372 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 FBXO4Q9UKT5 387 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 NEU3Q9UQ49 428 aa12.29□□□□□ -0.44
SMARCA4-202ENST00000413806 ALG1L2C9J202 215 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 WDR1O75083 606 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 WNT1P04628 370 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 NDUFB7P17568 137 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 MPPED2Q15777 294 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 AWAT1Q58HT5 328 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 RNASEKQ6P5S7 137 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 ZNF547Q8IVP9 402 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 PSENENQ9NZ42 101 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 NUP205Q92621 2012 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 FAHP16930 419 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 MYBPHQ13203 477 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 OR5I1Q13606 314 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 TRBV5-3A0A0A0MS03 114 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 CTGFP29279 349 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 HYAL1Q12794 435 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 C11orf42Q8N5U0 333 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 FOXB1Q99853 325 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 FBXO34Q9NWN3 711 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 WSB1Q9Y6I7 421 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 TUBGCP6Q96RT7 1819 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 ABCD4O14678 606 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 ADH4P08319 380 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 CDAP32320 146 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 C1orf53Q5VUE5 145 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 OR4S1Q8NGB4 309 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 MARVELD1Q9BSK0 173 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 VN1R1Q9GZP7 353 aa12.28□□□□□ -0.44
SMARCA4-202ENST00000413806 FAM221AA4D161 298 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 DEFA4P12838 97 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 CD200P41217 278 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 LGALS4P56470 323 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 DRAM2Q6UX65 266 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 LYPD8Q6UX82 237 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 VN1R4Q7Z5H5 301 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 ABI3BPQ7Z7G0 1075 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 SEC11CQ9BY50 192 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 PLEKHB1Q9UF11 243 aaPredicted RBP12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 CCL27Q9Y4X3 112 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 SLC22A20A6NK97 555 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 HMSDA8MTL9 139 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 IL2RAP01589 272 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 GLI4P10075 376 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 OR10J1P30954 320 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 TMEM97Q5BJF2 176 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 FAM109BQ6ICB4 259 aaPredicted RBP12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 HGDQ93099 445 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 GABRG3Q99928 467 aa12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 RALYQ9UKM9 306 aaKnown RBP12.27□□□□□ -0.44
SMARCA4-202ENST00000413806 M0R1X1 148 aa12.27□□□□□ -0.45
SMARCA4-202ENST00000413806 ZFPL1O95159 310 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms