RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 TRIM77I1YAP6 450 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 EIF1BO60739 113 aaKnown RBP12.1□□□□□ -0.47
NUB1-201ENST00000413040 CLEC9AQ6UXN8 241 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 SULF2Q8IWU5 870 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 RNF138Q8WVD3 245 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 PHYHIPLQ96FC7 376 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 OCSTAMPQ9BR26 566 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 NMES1Q9C002 83 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 TOR1AO14656 332 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 SGCEO43556 437 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 ZIC3O60481 467 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 FARS2O95363 451 aaKnown RBP12.1□□□□□ -0.47
NUB1-201ENST00000413040 UMODP07911 640 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 PRF1P14222 555 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 LIFP15018 202 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 NME2P22392 152 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 MPZP25189 248 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 THBS4P35443 961 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 CBX5P45973 191 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 SRSF3P84103 164 aaKnown RBP12.1□□□□□ -0.47
NUB1-201ENST00000413040 GUCA2BQ16661 112 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 HIST3H3Q16695 136 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 Q7L0L9 218 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 AGBL5Q8NDL9 886 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 SEMA6DQ8NFY4 1073 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 RNF141Q8WVD5 230 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 DNTTIP1Q9H147 329 aa12.1□□□□□ -0.47
NUB1-201ENST00000413040 IGHV1-45A0A0A0MS14 117 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 ACTL6AO96019 429 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 CCNOP22674 350 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 ACKR3P25106 362 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
NUB1-201ENST00000413040 RSPO1Q2MKA7 263 aaPredicted RBP12.09□□□□□ -0.47
NUB1-201ENST00000413040 C9orf135Q5VTT2 229 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 ARL11Q969Q4 196 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 SGK3Q96BR1 496 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 SRXN1Q9BYN0 137 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 RAB18Q9NP72 206 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 FAM96BQ9Y3D0 163 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 FREM1Q5H8C1 2179 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 ABCD4O14678 606 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 CXCL13O43927 109 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 HAS2Q92819 552 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 BORCS8Q96FH0 119 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 C2orf50Q96LR7 162 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 CMSS1Q9BQ75 279 aaKnown RBP12.09□□□□□ -0.47
NUB1-201ENST00000413040 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 CHST5Q9GZS9 411 aa12.09□□□□□ -0.47
NUB1-201ENST00000413040 BET1O15155 118 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 RCC1P18754 421 aaPredicted RBP12.08□□□□□ -0.48
NUB1-201ENST00000413040 CCL1P22362 96 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 HTR5AP47898 357 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 PDSS1Q5T2R2 415 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 RPL7L1Q6DKI1 246 aaKnown RBP12.08□□□□□ -0.48
NUB1-201ENST00000413040 FAM122CQ6P4D5 195 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 SGPP2Q8IWX5 399 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 PP6455Q8WZ26 134 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 CCDC187A0A096LP49 1063 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 TMEM218A2RU14 115 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 PCP4L1A6NKN8 68 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 DNASE2O00115 360 aaPredicted RBP12.08□□□□□ -0.48
NUB1-201ENST00000413040 COX6A1P12074 109 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 PTGER4P35408 488 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 H3F3AP84243 136 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 KCNMB1Q16558 191 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 PHLDA2Q53GA4 152 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 TSPO2Q5TGU0 170 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 PRSS54Q6PEW0 395 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 EMG1Q92979 244 aaKnown RBP12.08□□□□□ -0.48
NUB1-201ENST00000413040 REEP6Q96HR9 211 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 SMOC1Q9H4F8 434 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 NXT1Q9UKK6 140 aaKnown RBP12.08□□□□□ -0.48
NUB1-201ENST00000413040 OSGIN2Q9Y236 505 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 COL6A3P12111 3177 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 A0A0G2JMM0 328 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 A0A1W2PPB8 328 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 A0A1W2PRS3 328 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 SERPINE3A8MV23 424 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 KIR3DP1A8MWS1 328 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 VAMP5O95183 116 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 P04436 131 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 OR5H8P0DN80 308 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 ZNF32P17041 273 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 OR2A2Q6IF42 318 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 HAGHLQ6PII5 290 aaPredicted RBP12.08□□□□□ -0.48
NUB1-201ENST00000413040 PUSL1Q8N0Z8 303 aaKnown RBP12.08□□□□□ -0.48
NUB1-201ENST00000413040 GPR137CQ8N3F9 429 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 PIGCQ92535 297 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 NABP1Q96AH0 204 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 NUDT16L1Q9BRJ7 211 aaKnown RBP12.08□□□□□ -0.48
NUB1-201ENST00000413040 PCDHB16Q9NRJ7 776 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 PCDHGA1Q9Y5H4 931 aa12.08□□□□□ -0.48
NUB1-201ENST00000413040 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
NUB1-201ENST00000413040 LRP3O75074 770 aa12.07□□□□□ -0.48
NUB1-201ENST00000413040 ATG12O94817 140 aa12.07□□□□□ -0.48
NUB1-201ENST00000413040 DKK1O94907 266 aa12.07□□□□□ -0.48
NUB1-201ENST00000413040 PDGFBP01127 241 aaPredicted RBP12.07□□□□□ -0.48
NUB1-201ENST00000413040 RFC3P40938 356 aa12.07□□□□□ -0.48
NUB1-201ENST00000413040 CARD18P57730 90 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms