RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 DPRXA6NFQ7 191 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 C5orf58C9J3I9 102 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 LRRN3E7EW58 273 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 H3BN98 237 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SMLR1H3BR10 107 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 GABARAPH6UMI1 98 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF593O00488 134 aaPredicted RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 PDCD5O14737 125 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 TSPAN4O14817 238 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SURF4O15260 269 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 RAMP1O60894 148 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 MRPL33O75394 65 aaKnown RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SCO1O75880 301 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 PRG2P13727 222 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 RPA2P15927 270 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 HLA-GP17693 338 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 CELP19835 753 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 CXCL2P19875 107 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 TNFRSF1BP20333 461 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 COX5AP20674 150 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 GIFP27352 417 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 POU1F1P28069 291 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 AQP1P29972 269 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 ACAA2P42765 397 aaKnown RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SLC16A1P53985 500 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SEC61A1P61619 476 aaKnown RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SLC35A1P78382 337 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 H3F3AP84243 136 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 NHLH2Q02577 135 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SSBP1Q04837 148 aaKnown RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 BSPH1Q075Z2 132 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 TRAM2Q15035 370 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF311Q5JNZ3 666 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 FAM209BQ5JX69 171 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 TIMM23BQ5SRD1 257 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 OR2G6Q5TZ20 316 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 FBXW9Q5XUX1 488 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF626Q68DY1 528 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 DMKNQ6E0U4 476 aaPredicted RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 WBP2NLQ6ICG8 309 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 ADAM5Q6NVV9 412 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SFXN4Q6P4A7 337 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 PRSS57Q6UWY2 283 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SSX8Q7RTT4 187 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SLC36A1Q7Z2H8 476 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 BIVMQ86UB2 503 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 TIGD4Q8IY51 512 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 RNF113BQ8IZP6 322 aaKnown RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF433Q8N7K0 673 aaPredicted RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 MOSPD2Q8NHP6 518 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 BBS10Q8TAM1 723 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 RPS4Y2Q8TD47 263 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 THEM6Q8WUY1 208 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 IGFBPL1Q8WX77 278 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 RAB40AQ8WXH6 277 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 NEUROG1Q92886 237 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 TMEM203Q969S6 136 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 PHF21AQ96BD5 680 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 LINC00052Q96N35 136 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 EGLN1Q9GZT9 426 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 GPN1Q9HCN4 374 aaPredicted RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 UPB1Q9UBR1 384 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 RPS6KB2Q9UBS0 482 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF222Q9UK12 451 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 COPS3Q9UNS2 423 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 BAIAP2Q9UQB8 552 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SLC9A8Q9Y2E8 581 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 FLVCR1Q9Y5Y0 555 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 ARFGEF3Q5TH69 2177 aa4.58□□□□□ -1.68
LINC00342-201ENST00000412393 A0A087WUU8 490 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 A0A0D9SG52 128 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 ANKRD20A5PA0PJZ0 165 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 LIPT2A6NK58 231 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 OR5H1A6NKK0 313 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 PCP4L1A6NKN8 68 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 A8MVM7 634 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 F8W036 122 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 H7C1Q1 480 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 H7C2Y5 167 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 L7N2F9 121 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 M0R129 80 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 WRBO00258 174 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 FRS3O43559 492 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 RAD51DO75771 328 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 ARL6IP5O75915 188 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 AKR7A3O95154 331 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 AHSA1O95433 338 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 TFP02787 698 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 MT-ND5P03915 603 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 OPN1SWP03999 348 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 EIF4EP06730 217 aaKnown RBP4.57□□□□□ -1.68
LINC00342-201ENST00000412393 IGFBP1P08833 259 aaPredicted RBP4.57□□□□□ -1.68
LINC00342-201ENST00000412393 UCHL1P09936 223 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 SMIM6P0DI80 62 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 CD37P11049 281 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 FOLR2P14207 255 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 PAX1P15863 534 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 MGMTP16455 207 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 PMELP40967 661 aa4.57□□□□□ -1.68
LINC00342-201ENST00000412393 OMPP47874 163 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms