RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 OR2F2O95006 317 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 TMEM225BP0DP42 221 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 VAMP1P23763 118 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 OR2F1Q13607 317 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 OR8B8Q15620 311 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 TSPO2Q5TGU0 170 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 OR5AP2Q8NGF4 316 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 PCNPQ8WW12 178 aaKnown RBP14.6□□□□□ -0.07
NUP50-202ENST00000396096 SPSB4Q96A44 273 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 TMEM230Q96A57 120 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 TTTY12Q9BZ98 90 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 PRDM14Q9GZV8 571 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 RNF122Q9H9V4 155 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 ELL3Q9HB65 397 aaPredicted RBP14.6□□□□□ -0.07
NUP50-202ENST00000396096 PARPBPQ9NWS1 579 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 HSF4Q9ULV5 492 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 IGKV1-27A0A075B6S5 117 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 CDK2AP1O14519 115 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 RRP8O43159 456 aaKnown RBP14.59□□□□□ -0.07
NUP50-202ENST00000396096 XRCC2O43543 280 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 MRPL33O75394 65 aaKnown RBP14.59□□□□□ -0.07
NUP50-202ENST00000396096 SFT2D2O95562 160 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 CELA3AP09093 270 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 ITGA3P26006 1051 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 AVPR2P30518 371 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 OR3A2P47893 321 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 RBP2P50120 134 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 FAM3AP98173 230 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 CAMK2BQ13554 666 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 SURF2Q15527 256 aaPredicted RBP14.59□□□□□ -0.07
NUP50-202ENST00000396096 AANATQ16613 207 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 AADACL3Q5VUY0 350 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 ZNF660Q6AZW8 331 aaPredicted RBP14.59□□□□□ -0.07
NUP50-202ENST00000396096 OVCH2Q7RTZ1 564 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 CSNK2A3Q8NEV1 391 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 CASTOR1Q8WTX7 329 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 PPP1R1CQ8WVI7 109 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 WBP1Q96G27 269 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 TECTBQ96PL2 329 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 ST6GALNAC5Q9BVH7 336 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 C1QTNF5Q9BXJ0 243 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 HES7Q9BYE0 225 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 WDFY3Q8IZQ1 3526 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 CNTRLQ7Z7A1 2325 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 VPS13AQ96RL7 3174 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 NRASP01111 189 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 PDGFAP04085 211 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 NMBP08949 121 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 NPY4RP50391 375 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.59□□□□□ -0.07
NUP50-202ENST00000396096 CCDC28AQ8IWP9 274 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 EMG1Q92979 244 aaKnown RBP14.59□□□□□ -0.07
NUP50-202ENST00000396096 RTBDNQ9BSG5 229 aaPredicted RBP14.59□□□□□ -0.07
NUP50-202ENST00000396096 PPA2Q9H2U2 334 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 IL36GQ9NZH8 169 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 FRYLO94915 3013 aa14.59□□□□□ -0.07
NUP50-202ENST00000396096 COL6A3P12111 3177 aa14.58□□□□□ -0.07
NUP50-202ENST00000396096 ZNF724A8MTY0 619 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 SYNGR4O95473 234 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 UBA52P62987 128 aaKnown RBP14.58□□□□□ -0.08
NUP50-202ENST00000396096 ZNF92Q03936 586 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 RSU1Q15404 277 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 PABPC1L2AQ5JQF8 200 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 RGS7BPQ6MZT1 257 aaPredicted RBP14.58□□□□□ -0.08
NUP50-202ENST00000396096 COLCA1Q6ZS62 124 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 PXT1Q8NFP0 134 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 BORCS8Q96FH0 119 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 SEC22AQ96IW7 307 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 PLEKHJ1Q9NW61 149 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 MCTS1Q9ULC4 181 aaKnown RBP14.58□□□□□ -0.08
NUP50-202ENST00000396096 EDARQ9UNE0 448 aa14.58□□□□□ -0.08
NUP50-202ENST00000396096 FAM230AA0A1W2PPH8 454 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 hCG_1807616A0A1W2PRN6 198 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 HTR3BO95264 441 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 SERPINA5P05154 406 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 ZNF806P0C7X5 589 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 RFC3P40938 356 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 FUT6P51993 359 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 ATP1B3P54709 279 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 SIGIRRQ6IA17 410 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 ALKAL2Q6UX46 152 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 KCTD9Q7L273 389 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 C6orf201Q7Z4U5 140 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 TMEM251Q8N6I4 163 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 OR5M9Q8NGP3 310 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 NMES1Q9C002 83 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 BCO1Q9HAY6 547 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 SLC7A10Q9NS82 523 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 EHFQ9NZC4 300 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 DMDP11532 3685 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 ZNF816-ZNF321PA0A0X1KG74 233 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 RNF222A6NCQ9 220 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 CSTBP04080 98 aaKnown RBP14.57□□□□□ -0.08
NUP50-202ENST00000396096 EDN3P14138 238 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 GABRR1P24046 479 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 ECI1P42126 302 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 MAGEA5P43359 124 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 SUPT4H1P63272 117 aaKnown RBP14.57□□□□□ -0.08
NUP50-202ENST00000396096 ARF1P84077 181 aaKnown RBP14.57□□□□□ -0.08
NUP50-202ENST00000396096 CYCSP99999 105 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms