RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CD200P41217 278 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SOX8P57073 446 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 WIPI1Q5MNZ9 446 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SSX6Q7RTT6 188 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ASCL5Q7RTU5 278 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 BCDIN3DQ7Z5W3 292 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZAR1Q86SH2 424 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 MEX3DQ86XN8 651 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SAXO1Q8IYX7 474 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 DTX3Q8N9I9 347 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 WDSUB1Q8N9V3 476 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 NANPQ8TBE9 248 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM45BQ96B21 275 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF845Q96IR2 970 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GPA33Q99795 319 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SFXN3Q9BWM7 321 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 MRPL13Q9BYD1 178 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 AICDAQ9GZX7 198 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SLC25A18Q9H1K4 315 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 IL19Q9UHD0 177 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 KCNE5Q9UJ90 142 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ARPC1BO15143 372 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ARPC5O15511 151 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 IFNA1P01562 189 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 HLA-DQB1P01920 261 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 INHBBP09529 407 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ATF1P18846 271 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GZMKP49863 264 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TMPRSS3P57727 454 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PPP1R32Q7Z5V6 425 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 RDH10Q8IZV5 341 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF436Q9C0F3 470 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PRO3102Q9H379 93 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PLEKHA2Q9HB19 425 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TAS2R3Q9NYW6 316 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FLVCR1Q9Y5Y0 555 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 A0A1W2PS29 197 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 HBE1P02100 147 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GABRR1P24046 479 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 EGR4Q05215 589 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FNDC7Q5VTL7 733 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FAM71E2Q8N5Q1 922 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM229BQ8NBD8 167 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZPLD1Q8TCW7 415 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 RNF141Q8WVD5 230 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PGLYRP3Q96LB9 341 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GSKIPQ9P0R6 139 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 NPTNQ9Y639 398 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 AKAP13Q12802 2813 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PATE3B3GLJ2 98 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 EEF1E1-BLOC1S5C9J1V9 151 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZIC2O95409 532 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SRP9P49458 86 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 INSM1Q01101 510 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 DUSP2Q05923 314 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 IKZF1Q13422 519 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 DBX2Q6ZNG2 339 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SLC25A26Q70HW3 274 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TRAPPC6BQ86SZ2 158 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 OR5AP2Q8NGF4 316 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF519Q8TB69 540 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CASTOR1Q8WTX7 329 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ARL11Q969Q4 196 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ABHD1Q96SE0 405 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 RHBDD3Q9Y3P4 386 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 NDUFB6O95139 128 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SFTPBP07988 381 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 IDH3GP51553 393 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SNU13P55769 128 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FOXO1Q12778 655 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CD163Q86VB7 1156 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CATSPERDQ86XM0 798 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FAM58AQ8N1B3 248 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GNPNAT1Q96EK6 184 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 AKR1E2Q96JD6 320 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 S1PR3Q99500 378 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 RHNO1Q9BSD3 238 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PIGMQ9H3S5 423 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TAAR3PQ9P1P4 343 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TRAPPC2LQ9UL33 140 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PCDHB10Q9UN67 800 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CELSR3Q9NYQ7 3312 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 HMSDA8MTL9 139 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF732B4DXR9 585 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 K7EPK0 472 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ATP6V1G1O75348 118 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 IFNA2P01563 188 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PGA4P0DJD7 388 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 HIST1H1DP16402 221 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GNRHRP30968 328 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SNCAP37840 140 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 MEOX1P50221 254 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 UNQ9370/PRO34162Q6UXP9 181 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 KCTD9Q7L273 389 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PIGTQ969N2 578 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CITED4Q96RK1 184 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PLEKHB1Q9UF11 243 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 DUXBA0A1W2PPF3 345 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 DEGS1O15121 323 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 KNG1P01042 644 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms