RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 HIST1H1DP16402 221 aaKnown RBP12.67□□□□□ -0.38
SREBF1-205ENST00000395757 CYB561P49447 251 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 RELQ04864 619 aaPredicted RBP12.67□□□□□ -0.38
SREBF1-205ENST00000395757 STPG2Q8N412 459 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 SPICQ8N5J4 248 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 PXT1Q8NFP0 134 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 LPAR5Q9H1C0 372 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 DEFB127Q9H1M4 99 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 RAD51DO75771 328 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 NMBP08949 121 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 FBXL14Q8N1E6 418 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 PAQR4Q8N4S7 273 aaPredicted RBP12.67□□□□□ -0.38
SREBF1-205ENST00000395757 OR51F2Q8NH61 342 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 TERB2Q8NHR7 220 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 SLC25A28Q96A46 364 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 P4HTMQ9NXG6 502 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 A0A1B0GV90 55 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 EPHA1P21709 976 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 MEOX2P50222 304 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 ZNF260Q3ZCT1 412 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 PLAC9Q5JTB6 97 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 SLC25A24Q6NUK1 477 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 NAXDQ8IW45 347 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 ZNF100Q8IYN0 542 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 SEMA6DQ8NFY4 1073 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 PIGQQ9BRB3 760 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 SLC7A11Q9UPY5 501 aa12.67□□□□□ -0.38
SREBF1-205ENST00000395757 TRAV39A0A0B4J263 110 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 IFNA21P01568 189 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 AKR1C3P42330 323 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 HERV-K104P61576 105 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 PIGYQ3MUY2 71 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 TMEM164Q5U3C3 297 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 SLC25A26Q70HW3 274 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 OR10D3Q8NH80 312 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 SECTM1Q8WVN6 248 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 SRXN1Q9BYN0 137 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 HDGFL3Q9Y3E1 203 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 BPNT1O95861 308 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 FGL1Q08830 312 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 PMS2CLQ68D20 193 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 TMEM105Q8N8V8 129 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 SLC25A43Q8WUT9 341 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-205ENST00000395757 DMDP11532 3685 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 MED13LQ71F56 2210 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 AQP8O94778 261 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 CD1AP06126 327 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 BLOC1S1P78537 153 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 ZNF169Q14929 603 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-205ENST00000395757 PCOLCEQ15113 449 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 UBE2V2Q15819 145 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 C11orf87Q6NUJ2 197 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 TMPRSS7Q7RTY8 843 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 OR6X1Q8NH79 312 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 PFDN5Q99471 154 aa12.66□□□□□ -0.38
SREBF1-205ENST00000395757 ZNF629Q9UEG4 869 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-205ENST00000395757 CHCHD2Q9Y6H1 151 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-205ENST00000395757 RFPL4AA6NLU0 287 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 RFPL4AL1F8VTS6 287 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 HOXB1P14653 301 aaPredicted RBP12.65□□□□□ -0.38
SREBF1-205ENST00000395757 CPN1P15169 458 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 PSMB6P28072 239 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 RAB32Q13637 225 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 C9orf152Q5JTZ5 239 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 ACER2Q5QJU3 275 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 ZNF660Q6AZW8 331 aaPredicted RBP12.65□□□□□ -0.38
SREBF1-205ENST00000395757 P4HA3Q7Z4N8 544 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 NELFAQ9H3P2 528 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 RPS10-NUDT3A0A1W2PQS6 291 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 C5orf49A4QMS7 147 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 CER1O95813 267 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 ITGB2P05107 769 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 SUMO3P55854 103 aaPredicted RBP12.65□□□□□ -0.38
SREBF1-205ENST00000395757 PGAP1Q75T13 922 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 FNDC9Q8TBE3 224 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 HIST1H2AAQ96QV6 131 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 WDR13Q9H1Z4 485 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.65□□□□□ -0.38
SREBF1-205ENST00000395757 FAM96BQ9Y3D0 163 aa12.65□□□□□ -0.38
SREBF1-205ENST00000395757 A0A1B0GTI1 187 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 AQP7P3A6NL99 342 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 G3V3Q6 166 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 CBR1P16152 277 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 CPT2P23786 658 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 GNRHRP30968 328 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 CAV2P51636 162 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 GRB2P62993 217 aaKnown RBP12.65□□□□□ -0.39
SREBF1-205ENST00000395757 CSRP2Q16527 193 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 ATP1A1-AS1Q5TC04 95 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 OR5M8Q8NGP6 311 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 SLCO5A1Q9H2Y9 848 aa12.65□□□□□ -0.39
SREBF1-205ENST00000395757 HS3ST1O14792 307 aa12.64□□□□□ -0.39
SREBF1-205ENST00000395757 CELA3AP09093 270 aa12.64□□□□□ -0.39
SREBF1-205ENST00000395757 SLC23A3Q6PIS1 610 aa12.64□□□□□ -0.39
SREBF1-205ENST00000395757 SLC22A25Q6T423 547 aa12.64□□□□□ -0.39
SREBF1-205ENST00000395757 SGPP2Q8IWX5 399 aa12.64□□□□□ -0.39
SREBF1-205ENST00000395757 HSD17B11Q8NBQ5 300 aa12.64□□□□□ -0.39
SREBF1-205ENST00000395757 RDH5Q92781 318 aa12.64□□□□□ -0.39
SREBF1-205ENST00000395757 H7C2Y5 167 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms