RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 CHAF1BQ13112 559 aa9.02□□□□□ -0.97
HIF1A-203ENST00000394997 RNF212Q495C1 297 aa9.02□□□□□ -0.97
HIF1A-203ENST00000394997 SLC22A6Q4U2R8 563 aa9.02□□□□□ -0.97
HIF1A-203ENST00000394997 NOXO1Q8NFA2 376 aa9.02□□□□□ -0.97
HIF1A-203ENST00000394997 SEMA6DQ8NFY4 1073 aa9.02□□□□□ -0.97
HIF1A-203ENST00000394997 RAB3CQ96E17 227 aa9.02□□□□□ -0.97
HIF1A-203ENST00000394997 SPACA9Q96E40 222 aaPredicted RBP9.02□□□□□ -0.97
HIF1A-203ENST00000394997 ALX4Q9H161 411 aaPredicted RBP9.02□□□□□ -0.97
HIF1A-203ENST00000394997 CNTD2Q9H8S5 307 aa9.02□□□□□ -0.97
HIF1A-203ENST00000394997 RASL12Q9NYN1 266 aa9.02□□□□□ -0.97
HIF1A-203ENST00000394997 LOC107986453A0A1B0GWG9 222 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 TSTD3H0UI37 97 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 OR2T1O43869 369 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 JMJD7P0C870 316 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 C4orf17Q53FE4 359 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 PLAC9Q5JTB6 97 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 LINC00346Q8IVM7 164 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 OR6X1Q8NH79 312 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 MEGF10Q96KG7 1140 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 GSN-AS1Q9NRJ2 163 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 ZNF701Q9NV72 531 aaPredicted RBP9.01□□□□□ -0.97
HIF1A-203ENST00000394997 UQCC1Q9NVA1 299 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 COPS7AQ9UBW8 275 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 LRRC3CA6NJW4 275 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 STK17BO94768 372 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 OR8U9P0C7N5 309 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 CASRP41180 1078 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 GLP1RP43220 463 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 ALDH3B1P43353 468 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 RAB5CP51148 216 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 SSBP1Q04837 148 aaKnown RBP9.01□□□□□ -0.97
HIF1A-203ENST00000394997 DMRTC1Q5HYR2 192 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 PABPC1L2AQ5JQF8 200 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 TRAPPC6BQ86SZ2 158 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 PNLDC1Q8NA58 520 aaKnown RBP9.01□□□□□ -0.97
HIF1A-203ENST00000394997 PSMF1Q92530 271 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 RHOVQ96L33 236 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 CLCC1Q96S66 551 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 PRR13Q9NZ81 148 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 EMC9Q9Y3B6 208 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 LRP3O75074 770 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 RPA2P15927 270 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 G0S2P27469 103 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 NPY4RP50391 375 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 Q6ZRG5 221 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 OR10H5Q8NGA6 315 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 OR13C3Q8NGS6 347 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 AKR7LQ8NHP1 331 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 NUDCD2Q8WVJ2 157 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 DUSP23Q9BVJ7 150 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 ZNF107Q9UII5 783 aaPredicted RBP9.01□□□□□ -0.97
HIF1A-203ENST00000394997 GDF2Q9UK05 429 aaPredicted RBP9.01□□□□□ -0.97
HIF1A-203ENST00000394997 OR52A1Q9UKL2 312 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 CACNA1DQ01668 2161 aa9.01□□□□□ -0.97
HIF1A-203ENST00000394997 A0A1W2PPH5 198 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 IFNA21P01568 189 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 IL2RAP01589 272 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 PMP2P02689 132 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 CCL4P13236 92 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 ACY1Q03154 408 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 SLC23A3Q6PIS1 610 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 ZNF704Q6ZNC4 412 aaPredicted RBP9□□□□□ -0.97
HIF1A-203ENST00000394997 TMEM105Q8N8V8 129 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 HSD17B11Q8NBQ5 300 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 OR52N4Q8NGI2 321 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 ZNF837Q96EG3 531 aaPredicted RBP9□□□□□ -0.97
HIF1A-203ENST00000394997 SHDQ96IW2 340 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 JSRP1Q96MG2 331 aaPredicted RBP9□□□□□ -0.97
HIF1A-203ENST00000394997 PRRT1Q99946 306 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 EMC6Q9BV81 110 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 V9GYS6 101 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 RAD51DO75771 328 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 HEXBP07686 556 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 ERCC1P07992 297 aaPredicted RBP9□□□□□ -0.97
HIF1A-203ENST00000394997 SMIM6P0DI80 62 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 VSIG8P0DPA2 414 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 CCL3P10147 92 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 CRYGSP22914 178 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 PSMB6P28072 239 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 TMEM50BP56557 158 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 BATFQ16520 125 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 LYSMD4Q5XG99 296 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 CYB5R2Q6BCY4 276 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 ETV3LQ6ZN32 361 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 DPPA2Q7Z7J5 298 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 ZNF561Q8N587 486 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 IFI44Q8TCB0 444 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 SECTM1Q8WVN6 248 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 SLC25A21Q9BQT8 299 aaPredicted RBP9□□□□□ -0.97
HIF1A-203ENST00000394997 ST6GALNAC5Q9BVH7 336 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 SRXN1Q9BYN0 137 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 TOLLIPQ9H0E2 274 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 UNKLQ9H9P5 680 aaKnown RBP9□□□□□ -0.97
HIF1A-203ENST00000394997 BARX1Q9HBU1 254 aaPredicted RBP9□□□□□ -0.97
HIF1A-203ENST00000394997 RNASEK-C17orf49H0YIS7 233 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 AHSA1O95433 338 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 MPIG6BO95866 241 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 RNF224P0DH78 156 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 HLA-GP17693 338 aa9□□□□□ -0.97
HIF1A-203ENST00000394997 MSX1P28360 303 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms