RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 AMDHD2Q9Y303 409 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 IGHV3-9P01782 118 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 SLC35A1P78382 337 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 FABP9Q0Z7S8 132 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 SFT2D1Q8WV19 159 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 MCHR2Q969V1 340 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 PAPOLGQ9BWT3 736 aaKnown RBP10.09□□□□□ -0.79
SMAD9-202ENST00000379826 AK3Q9UIJ7 227 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 DDAH2O95865 285 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 KISS1Q15726 138 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 GUK1Q16774 197 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 DRAM2Q6UX65 266 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 RBMS3Q6XE24 437 aaKnown RBP10.09□□□□□ -0.79
SMAD9-202ENST00000379826 SEC11CQ9BY50 192 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 A0A1W2PPC4 97 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 RPL23AP62750 156 aaKnown RBP10.08□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF260Q3ZCT1 412 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 PLXDC2Q6UX71 529 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 HIST2H3AQ71DI3 136 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 CNEP1R1Q8N9A8 125 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF721Q8TF20 911 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 CLCC1Q96S66 551 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 FAAP24Q9BTP7 215 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 SPTBP11277 2137 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 DUSP1P28562 367 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF133P52736 654 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-202ENST00000379826 TMEM33P57088 247 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 GGNBP1Q5YKI7 109 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 GJC3Q8NFK1 279 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 ST8SIA1Q92185 356 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 DYRK2Q92630 601 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 SLC25A31Q9H0C2 315 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 MOB1AQ9H8S9 216 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 LPAR3Q9UBY5 353 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 AUP1Q9Y679 476 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 DNAH12Q6ZR08 3092 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 ZFP92A6NM28 416 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 MSR1P21757 451 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 DVL1P1P54792 670 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-202ENST00000379826 ARRDC1Q8N5I2 433 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 IP6K3Q96PC2 410 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 GON4LQ3T8J9 2241 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 TXNDC12O95881 172 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 CD37P11049 281 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 C4orf17Q53FE4 359 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 AWAT1Q58HT5 328 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 NCMAPQ5T1S8 102 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 TMEM268Q5VZI3 342 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 AQP3Q92482 292 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 REEP6Q96HR9 211 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 HDHD3Q9BSH5 251 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-202ENST00000379826 PECRQ9BY49 303 aa10.08□□□□□ -0.8
SMAD9-202ENST00000379826 CST4P01036 141 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 DEFA6Q01524 100 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 PNLIPRP3Q17RR3 467 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF561Q8N587 486 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 SLC26A10Q8NG04 563 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 SGK3Q96BR1 496 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 OR5H15A6NDH6 313 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 A6NLC8 198 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 KLRC4-KLRK1H3BQV0 150 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 ABHD16AO95870 558 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 TTRP02766 147 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 FTH1P19P0C7X4 201 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 S100PP25815 95 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 MRPS34P82930 218 aaKnown RBP10.07□□□□□ -0.8
SMAD9-202ENST00000379826 SKA3Q8IX90 412 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 CMTM1Q8IZ96 169 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 OR2AE1Q8NHA4 323 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 FLVCR1-AS1Q8TAF5 88 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 TAAR9Q96RI9 348 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF426Q9BUY5 554 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF705GA8MUZ8 300 aaPredicted RBP10.07□□□□□ -0.8
SMAD9-202ENST00000379826 MSTNO14793 375 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 CD79AP11912 226 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 DCDP81605 110 aaKnown RBP10.07□□□□□ -0.8
SMAD9-202ENST00000379826 LY6G6FQ5SQ64 297 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 RTN4IP1Q8WWV3 396 aaPredicted RBP10.07□□□□□ -0.8
SMAD9-202ENST00000379826 IGLV1-36A0A0B4J1U3 117 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 E5RGE8 158 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 M0R135 149 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 RAB27BO00194 218 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 TNFSF11O14788 317 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 CYB5BO43169 146 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 PTGFRP43088 359 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 HOXA1P49639 335 aaPredicted RBP10.07□□□□□ -0.8
SMAD9-202ENST00000379826 IGSF11Q5DX21 431 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 SLC16A14Q7RTX9 510 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 TMEM123Q8N131 208 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 LRRC75AQ8NAA5 344 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 OR10G3Q8NGC4 313 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF799Q96GE5 643 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 GPR37O15354 613 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 LGI3Q8N145 548 aa10.07□□□□□ -0.8
SMAD9-202ENST00000379826 ZSCAN4Q8NAM6 433 aaPredicted RBP10.07□□□□□ -0.8
SMAD9-202ENST00000379826 SMCO3A2RU48 225 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 ST8SIA3O43173 380 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 IFNA4P05014 189 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 SERPINE2P07093 398 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms