RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 NUDCD2Q8WVJ2 157 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 HPSE2Q8WWQ2 592 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 DVL3Q92997 716 aaPredicted RBP14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 RAB3CQ96E17 227 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 TM2D1Q9BX74 207 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 CD3DP04234 171 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 HOXD4P09016 255 aaPredicted RBP14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 GLI4P10075 376 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 HIST1H1DP16402 221 aaKnown RBP14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 HOXC12P31275 282 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 ATP1B3P54709 279 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 SPATA46Q5T0L3 261 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 BHLHA15Q7RTS1 189 aaPredicted RBP14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 C17orf78Q8N4C9 275 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 CSNK2A3Q8NEV1 391 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 CDH20Q9HBT6 801 aa14.93□□□□□ -0.02
THUMPD2-201ENST00000378727 PQLC2LA1A4F0 135 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 J3QW42 95 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 SSX5O60225 188 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 PSMB1P20618 241 aaKnown RBP14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 HLA-DMAP28067 261 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 PDZK1IP1Q13113 114 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 FAM189A2Q15884 450 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 TRAPPC6BQ86SZ2 158 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 CALHM1Q8IU99 346 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 BHLHE23Q8NDY6 225 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 STEAP2Q8NFT2 490 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 OR8S1Q8NH09 359 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 ARHGAP5-AS1Q96IT6 56 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 METTL9Q9H1A3 318 aa14.92□□□□□ -0.02
THUMPD2-201ENST00000378727 HMX3A6NHT5 357 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 AKAIN1P0CW23 69 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 IL32P24001 234 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 MRPL49Q13405 166 aaKnown RBP14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 TMEM229BQ8NBD8 167 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 CCDC120Q96HB5 630 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 Q96M66 194 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 SFXN3Q9BWM7 321 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 C20orf85Q9H1P6 137 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 TP63Q9H3D4 680 aaPredicted RBP14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 ASF1BQ9NVP2 202 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 FLVCR2Q9UPI3 526 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 OR5H1A6NKK0 313 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 MFNGO00587 321 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 PRRG2O14669 202 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 HTR3BO95264 441 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 GSTP1P09211 210 aaKnown RBP14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 H2AFB2P0C5Z0 115 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 FAUP35544 74 aaKnown RBP14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 TAS2R19P59542 299 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 ERVS71-1P61550 626 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 PPP1CBP62140 327 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 RSU1Q15404 277 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 CEACAM21Q3KPI0 293 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 STEAP1BQ6NZ63 245 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 GFRALQ6UXV0 394 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 FBXW12Q6X9E4 464 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 ZDHHC23Q8IYP9 409 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 GVQW1Q8N7I0 195 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 PXT1Q8NFP0 134 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 OR6F1Q8NGZ6 308 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 NKIRAS2Q9NYR9 191 aa14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 EIF3KQ9UBQ5 218 aaKnown RBP14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 RP1L1Q8IWN7 2480 aaPredicted RBP14.91□□□□□ -0.02
THUMPD2-201ENST00000378727 PIEZO1Q92508 2521 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 TLN1Q9Y490 2541 aaKnown RBP14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 A0A0A6YYJ9 748 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 C1QTNF9BB2RNN3 333 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 CCNKO75909 580 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 IGLV1-44P01699 117 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 C1QTNF9P0C862 333 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 TRAPPC2P0DI81 140 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 TRAPPC2BP0DI82 140 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 OR2T2Q6IF00 324 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 FTMTQ8N4E7 242 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 OR56B4Q8NH76 319 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 OR2J1Q9GZK6 312 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 OBP2BQ9NPH6 170 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 ZNF107Q9UII5 783 aaPredicted RBP14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 TINAGQ9UJW2 476 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 ZNF835Q9Y2P0 537 aa14.9□□□□□ -0.02
THUMPD2-201ENST00000378727 CYB5AP00167 134 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 DHFRP00374 187 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 SFTPBP07988 381 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 CECR9P0C854 216 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 ZNF35P13682 527 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 CPT2P23786 658 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 BLVRBP30043 206 aaPredicted RBP14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 GPM6AP51674 278 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 UCP2P55851 309 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 RAG2P55895 527 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 ZNF611Q8N823 705 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 OR4S1Q8NGB4 309 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 IL36GQ9NZH8 169 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 TUBD1Q9UJT1 453 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 SLC25A15Q9Y619 301 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 C7orf66A4D0T2 115 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 M0QYG6 137 aa14.89□□□□□ -0.03
THUMPD2-201ENST00000378727 NDUFB6O95139 128 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms