RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 DUSP13Q9UII6 198 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 KCNE3Q9Y6H6 103 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 PDCD11Q14690 1871 aaKnown RBP13.03□□□□□ -0.32
PRDM16-203ENST00000378391 A0A1B0GTQ1 180 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 H3BVH4 76 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 ARPC3O15145 178 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 XRCC2O43543 280 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 ZNF250P15622 560 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 VWA2Q5GFL6 755 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 PRAMEF5Q5TYX0 476 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 PRAMEF6Q5VXH4 476 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 ANKRD16Q6P6B7 361 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 CMTM2Q8TAZ6 248 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 THOC3Q96J01 351 aaKnown RBP13.03□□□□□ -0.32
PRDM16-203ENST00000378391 ACTR3CQ9C0K3 210 aaPredicted RBP13.03□□□□□ -0.32
PRDM16-203ENST00000378391 FAM234AQ9H0X4 552 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 RIMS4Q9H426 269 aaPredicted RBP13.03□□□□□ -0.32
PRDM16-203ENST00000378391 MTFP1Q9UDX5 166 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 MMP17Q9ULZ9 603 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 LAMP3Q9UQV4 416 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 A0A1W2PNR3 127 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 SSSCA1O60232 199 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 PMCHP20382 165 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 VHLLQ6RSH7 139 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 PELI1Q96FA3 418 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 FAAP24Q9BTP7 215 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 C6orf106Q9H6K1 298 aaPredicted RBP13.03□□□□□ -0.32
PRDM16-203ENST00000378391 UCK1Q9HA47 277 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 WDR1O75083 606 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 CD82P27701 267 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 UBE2G2P60604 165 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 PARM1Q6UWI2 310 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 ANKRD33Q7Z3H0 272 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 SPICQ8N5J4 248 aa13.03□□□□□ -0.32
PRDM16-203ENST00000378391 GRPP07492 148 aa13.02□□□□□ -0.32
PRDM16-203ENST00000378391 TMEM97Q5BJF2 176 aa13.02□□□□□ -0.32
PRDM16-203ENST00000378391 TVP23CQ96ET8 276 aa13.02□□□□□ -0.32
PRDM16-203ENST00000378391 TRAF4Q9BUZ4 470 aaPredicted RBP13.02□□□□□ -0.32
PRDM16-203ENST00000378391 OR2J1Q9GZK6 312 aa13.02□□□□□ -0.32
PRDM16-203ENST00000378391 F5P12259 2224 aa13.02□□□□□ -0.32
PRDM16-203ENST00000378391 A0A0B4J2E0 115 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 A0A1B0GX12 115 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 CAPZBP47756 277 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 ARF6P62330 175 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 MLF2Q15773 248 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-203ENST00000378391 OR11H7Q8NGC8 314 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 OR13D1Q8NGV5 346 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 RSG1Q9BU20 258 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 DLL4Q9NR61 685 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 WNT1P04628 370 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 SUMO3P55854 103 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-203ENST00000378391 TCTAP57738 103 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 GUCA2AQ02747 115 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 ZNF787Q6DD87 383 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 CDC20BQ86Y33 519 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 TPPP3Q9BW30 176 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 RP1L1Q8IWN7 2480 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-203ENST00000378391 PDE6DO43924 150 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 SELEP16581 610 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 CCR5P51681 352 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 ACOT6Q3I5F7 207 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-203ENST00000378391 Q5BKY6 102 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 NCMAPQ5T1S8 102 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 ZNF66Q6ZN08 573 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 RXFP4Q8TDU9 374 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 SMIM7Q9BQ49 75 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 CTDSP1Q9GZU7 261 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 TMEM9BQ9NQ34 198 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 MGAMO43451 1857 aa13.02□□□□□ -0.33
PRDM16-203ENST00000378391 LINC00862A6NCI5 91 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 PPM1DO15297 605 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 IL3RAP26951 378 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 EDDM3AQ14507 147 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 OR2A2Q6IF42 318 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 LINC00696Q6ZRV3 163 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 THNSL2Q86YJ6 484 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 CCL4L1Q8NHW4 92 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 PP6455Q8WZ26 134 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 HGDQ93099 445 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 WDR34Q96EX3 536 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 SLC17A4Q9Y2C5 497 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 PLXNB2O15031 1838 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 K7EQM0 130 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 SLC17A3O00476 420 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 CXCL3P19876 107 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 AVPR2P30518 371 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 FZD2Q14332 565 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 OR8D4Q8NGM9 314 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 OR4F5Q8NH21 305 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 CIB3Q96Q77 187 aaPredicted RBP13.01□□□□□ -0.33
PRDM16-203ENST00000378391 OR4F4Q96R69 305 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 PPP1R3EQ9H7J1 279 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 RNASEK-C17orf49H0YIS7 233 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 NKX2-2O95096 273 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 WNT11O96014 354 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 COX5AP20674 150 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 GABRA4P48169 554 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 MVDP53602 400 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 KCNAB1Q14722 419 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 HLXQ14774 488 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms