RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ACSM4P0C7M7 580 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 RAC1P63000 192 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 HAGHQ16775 308 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 GSG1Q2KHT4 349 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 SFTPA2Q8IWL1 248 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 K7EQM0 130 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 HSD17B6O14756 317 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 TRAF3IP2O43734 574 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-201ENST00000378156 NDUFB6O95139 128 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 OR8U8P0C7N1 319 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 HAAOP46952 286 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 CD226Q15762 336 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 HES3Q5TGS1 186 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 KDF1Q8NAX2 398 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-201ENST00000378156 OR1F12Q8NHA8 337 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF816-ZNF321PA0A0X1KG74 233 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 CRYABP02511 175 aaKnown RBP13.41□□□□□ -0.26
NPHP4-201ENST00000378156 SIGLECL1Q8N7X8 197 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 DEFB108BQ8NET1 73 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 NXF2Q9GZY0 626 aaKnown RBP13.41□□□□□ -0.26
NPHP4-201ENST00000378156 FBXO4Q9UKT5 387 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 LSM2Q9Y333 95 aaKnown RBP13.41□□□□□ -0.26
NPHP4-201ENST00000378156 ATP23Q9Y6H3 246 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 FAM221AA4D161 298 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 RFPL4AA6NLU0 287 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 RFPL4AL1F8VTS6 287 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 AGFG1P52594 562 aaKnown RBP13.4□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF90Q03938 601 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 FUT7Q11130 342 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 DEGS2Q6QHC5 323 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 CLEC9AQ6UXN8 241 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 TRILQ7L0X0 811 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 WFDC8Q8IUA0 241 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 CMTM2Q8TAZ6 248 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 TMPRSS5Q9H3S3 457 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 RPH3ALQ9UNE2 315 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-201ENST00000378156 MYOFQ9NZM1 2061 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 OR8G2PQ6IF36 304 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 OR2A2Q6IF42 318 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 CPEB3Q8NE35 698 aaKnown RBP13.4□□□□□ -0.26
NPHP4-201ENST00000378156 OR5M9Q8NGP3 310 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 PPP1R1CQ8WVI7 109 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 KISS1RQ969F8 398 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-201ENST00000378156 LHX4Q969G2 390 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 APOBEC3DQ96AK3 386 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-201ENST00000378156 ST3GAL6Q9Y274 331 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 CACNA1IQ9P0X4 2223 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 TET1Q8NFU7 2136 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 TRGV8A0A0C4DH27 118 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 GLRA1P23415 457 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 ELLP55199 621 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-201ENST00000378156 OR2T2Q6IF00 324 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 JMJD6Q6NYC1 403 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-201ENST00000378156 OR5AP2Q8NGF4 316 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 RASL10BQ96S79 203 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 USB1Q9BQ65 265 aaKnown RBP13.4□□□□□ -0.26
NPHP4-201ENST00000378156 MEIKINA0A087WXM9 373 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 M0R1B8 84 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 RAB5AP20339 215 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 SRD5A2P31213 254 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 RAB35Q15286 201 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 C1QL3Q5VWW1 255 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 DLL4Q9NR61 685 aa13.4□□□□□ -0.26
NPHP4-201ENST00000378156 PLXNA1Q9UIW2 1896 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 GALNSP34059 522 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 COL13A1Q5TAT6 717 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-201ENST00000378156 SLC35G3Q8N808 338 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 SCCPDHQ8NBX0 429 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 TVP23CQ96ET8 276 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 RHOFQ9HBH0 211 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 MRM2Q9UI43 246 aaKnown RBP13.39□□□□□ -0.27
NPHP4-201ENST00000378156 BRCA1P38398 1863 aaKnown RBP13.39□□□□□ -0.27
NPHP4-201ENST00000378156 SIRPB1O00241 398 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 IL3RAP26951 378 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 LIMS1P48059 325 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 SLC37A1P57057 533 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 ADGRG3Q86Y34 549 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 NPEPL1Q8NDH3 523 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 OR13D1Q8NGV5 346 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 OR2AE1Q8NHA4 323 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 CORO2AQ92828 525 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 ACTR3CQ9C0K3 210 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-201ENST00000378156 OPA3Q9H6K4 179 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 SIRT4Q9Y6E7 314 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-201ENST00000378156 PATE3B3GLJ2 98 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 RER1O15258 196 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 FGF7P21781 194 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 THBS4P35443 961 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 UBE2G2P60604 165 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 FUT5Q11128 374 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 DRAM2Q6UX65 266 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 ARHGEF39Q8N4T4 335 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 FBXW5Q969U6 566 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 SLC35D1Q9NTN3 355 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 MTFP1Q9UDX5 166 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 PLPP3O14495 311 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 WDR1O75083 606 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 EPPINO95925 133 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 OR5H8P0DN80 308 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms