RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 TOR1AO14656 332 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 GEMIN2O14893 280 aaKnown RBP9.8□□□□□ -0.84
HDAC6-203ENST00000376619 VAMP5O95183 116 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 IGLV3-21P80748 117 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-203ENST00000376619 FAM189A2Q15884 450 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 RRNAD1Q96FB5 475 aaKnown RBP9.8□□□□□ -0.84
HDAC6-203ENST00000376619 CXorf58Q96LI9 332 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 TIMP4Q99727 224 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 ZNF649Q9BS31 505 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 SAV1Q9H4B6 383 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-203ENST00000376619 TUSC2O75896 110 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 SLC34A2O95436 690 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 TK1P04183 234 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 PTBP1P26599 531 aaKnown RBP eCLIP9.8□□□□□ -0.841e-16■■■■■ 43.3
HDAC6-203ENST00000376619 CAMLGP49069 296 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 FGL1Q08830 312 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 SNAI3Q3KNW1 292 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 ESCO2Q56NI9 601 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 TOR2AQ5JU69 321 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 ATPAF1Q5TC12 328 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-203ENST00000376619 OR1F12Q8NHA8 337 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 GLYATL2Q8WU03 294 aa9.8□□□□□ -0.84
HDAC6-203ENST00000376619 PTPN13Q12923 2485 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 PLXNB3Q9ULL4 1909 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 MCRIP1C9JLW8 97 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 K7EPK0 472 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 ERVH48-1M5A8F1 160 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 NKX2-8O15522 239 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 RAC1P63000 192 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 MC2RQ01718 297 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 MRPL49Q13405 166 aaKnown RBP9.79□□□□□ -0.84
HDAC6-203ENST00000376619 C9orf62Q8N4C0 152 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 FAM71E2Q8N5Q1 922 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 RNF133Q8WVZ7 376 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 PRRX2Q99811 253 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 NMNAT2Q9BZQ4 307 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 KLK13Q9UKR3 277 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 PPP1R3CQ9UQK1 317 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 DOCK11Q5JSL3 2073 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 KLRC4-KLRK1H3BQV0 150 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 EIF3GO75821 320 aaKnown RBP eCLIP9.79□□□□□ -0.84
HDAC6-203ENST00000376619 GABRA4P48169 554 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 EDDM3BP56851 147 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 PIGPP57054 158 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 KRBOX4Q5JUW0 171 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 CLVS2Q5SYC1 327 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 HACD4Q5VWC8 232 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 TERB2Q8NHR7 220 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 SCMH1Q96GD3 660 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 SDHAF2Q9NX18 166 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 ZNF319Q9P2F9 582 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 C2orf16Q68DN1 1984 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 SETD2Q9BYW2 2564 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-203ENST00000376619 A0A1W2PQD3 144 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 PTAFRP25105 342 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 MLF1P58340 268 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 PCBD1P61457 104 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 CDH26Q8IXH8 852 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 EMG1Q92979 244 aaKnown RBP9.79□□□□□ -0.84
HDAC6-203ENST00000376619 SDSLQ96GA7 329 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 CYYR1Q96J86 154 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 KCNK17Q96T54 332 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 GFI1Q99684 422 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 ZNF71Q9NQZ8 489 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-203ENST00000376619 EMC3Q9P0I2 261 aa9.79□□□□□ -0.84
HDAC6-203ENST00000376619 MEIKINA0A087WXM9 373 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 GALR2O43603 387 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 CHRM2P08172 466 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 TRAPPC2P0DI81 140 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 TRAPPC2BP0DI82 140 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 LIFP15018 202 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 RPL35P42766 123 aaKnown RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 TGFBR3Q03167 851 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 OR1S1Q8NH92 325 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 SYT3Q9BQG1 590 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 WDR13Q9H1Z4 485 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 FOXJ2Q9P0K8 574 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 FLVCR1Q9Y5Y0 555 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 TRAF3IP2O43734 574 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 CST7O76096 145 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 LINC00114Q6XXX2 140 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 SSX9Q7RTT3 188 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 RBPMSQ93062 196 aaKnown RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 SRXN1Q9BYN0 137 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 PCED1AQ9H1Q7 454 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 ZNF286AQ9HBT8 521 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 PRMT8Q9NR22 394 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 SLC7A10Q9NS82 523 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 CDC14BO60729 498 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 AGFG2O95081 481 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 GIPP09681 153 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 HIST1H1DP16402 221 aaKnown RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 PVALBP20472 110 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 H2BFSP57053 126 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 ZNF169Q14929 603 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 MICBQ29980 383 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 BPHLQ86WA6 291 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-203ENST00000376619 EXD3Q8N9H8 876 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 OR10AD1Q8NGE0 317 aa9.78□□□□□ -0.84
HDAC6-203ENST00000376619 OR6X1Q8NH79 312 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 288 ms