RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 STPG2Q8N412 459 aa10.29□□□□□ -0.76
PTCH1-203ENST00000375274 RBMXL3Q8N7X1 1067 aaKnown RBP10.29□□□□□ -0.76
PTCH1-203ENST00000375274 OR13D1Q8NGV5 346 aa10.29□□□□□ -0.76
PTCH1-203ENST00000375274 OR1F12Q8NHA8 337 aa10.29□□□□□ -0.76
PTCH1-203ENST00000375274 OIT3Q8WWZ8 545 aa10.29□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF426Q9BUY5 554 aa10.29□□□□□ -0.76
PTCH1-203ENST00000375274 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
PTCH1-203ENST00000375274 COL4A5P29400 1685 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 RTTNQ86VV8 2226 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 PHOX2AO14813 284 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 CDC14BO60729 498 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 TMIGD3P0DMS9 266 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-203ENST00000375274 SRFP11831 508 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 ARR3P36575 388 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 RRADP55042 308 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 PMP22Q01453 160 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 FABP9Q0Z7S8 132 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 PDCD1Q15116 288 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 C20orf196Q8IYI0 205 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 OR10G3Q8NGC4 313 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 OR8U1Q8NH10 309 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 KCNE4Q8WWG9 221 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 ROBO4Q8WZ75 1007 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 WFDC6Q9BQY6 131 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 FAAP24Q9BTP7 215 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 FOXQ1Q9C009 403 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 SLC35B3Q9H1N7 401 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 LAMP3Q9UQV4 416 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 ATAD5Q96QE3 1844 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 ASCL1P50553 236 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 MS4A7Q9GZW8 240 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-203ENST00000375274 DYNLRB1Q9NP97 96 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 CA10Q9NS85 328 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 CLEC18AA5D8T8 446 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 MASP2O00187 686 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 HRKO00198 91 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 COL9A1P20849 921 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 INSM1Q01101 510 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-203ENST00000375274 ZXDCQ2QGD7 858 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-203ENST00000375274 JMJD6Q6NYC1 403 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF429Q86V71 674 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 CLEC18CQ8NCF0 446 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 OR1L3Q8NH93 324 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 ASB5Q8WWX0 329 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 MCHR2Q969V1 340 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 TMEM18Q96B42 140 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 NTNG2Q96CW9 530 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 PIK3IP1Q96FE7 263 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 PRSS27Q9BQR3 290 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 OPA3Q9H6K4 179 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 RASL12Q9NYN1 266 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 PTP4A3O75365 173 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 EML2O95834 649 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 TMEM33P57088 247 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 ARSJQ5FYB0 599 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF574Q6ZN55 896 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-203ENST00000375274 IFI44Q8TCB0 444 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 CIB3Q96Q77 187 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-203ENST00000375274 MENTQ9BUN1 341 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 TMPRSS13Q9BYE2 586 aa10.28□□□□□ -0.76
PTCH1-203ENST00000375274 MRPL22Q9NWU5 206 aaKnown RBP10.28□□□□□ -0.76
PTCH1-203ENST00000375274 TRAV20A0A0B4J274 112 aa10.27□□□□□ -0.76
PTCH1-203ENST00000375274 H3BMH7 237 aa10.27□□□□□ -0.76
PTCH1-203ENST00000375274 PIAS2O75928 621 aa10.27□□□□□ -0.76
PTCH1-203ENST00000375274 CELA2BP08218 269 aaPredicted RBP10.27□□□□□ -0.76
PTCH1-203ENST00000375274 PGA3P0DJD8 388 aa10.27□□□□□ -0.76
PTCH1-203ENST00000375274 DSCR4P56555 118 aaPredicted RBP10.27□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF92Q03936 586 aa10.27□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF90Q03938 601 aa10.27□□□□□ -0.76
PTCH1-203ENST00000375274 CLEC9AQ6UXN8 241 aa10.27□□□□□ -0.76
PTCH1-203ENST00000375274 ADPRHL1Q8NDY3 354 aa10.27□□□□□ -0.76
PTCH1-203ENST00000375274 MITD1Q8WV92 249 aa10.27□□□□□ -0.76
PTCH1-203ENST00000375274 NANOS3P60323 173 aaKnown RBP10.27□□□□□ -0.77
PTCH1-203ENST00000375274 ACOT6Q3I5F7 207 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-203ENST00000375274 ZNF528Q3MIS6 628 aa10.27□□□□□ -0.77
PTCH1-203ENST00000375274 C9orf50Q5SZB4 431 aa10.27□□□□□ -0.77
PTCH1-203ENST00000375274 CLEC18BQ6UXF7 455 aa10.27□□□□□ -0.77
PTCH1-203ENST00000375274 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
PTCH1-203ENST00000375274 GNRHR2Q96P88 292 aa10.27□□□□□ -0.77
PTCH1-203ENST00000375274 ONECUT2O95948 504 aa10.27□□□□□ -0.77
PTCH1-203ENST00000375274 METTL15P1P0C7V9 234 aa10.27□□□□□ -0.77
PTCH1-203ENST00000375274 SRSF5Q13243 272 aaKnown RBP10.27□□□□□ -0.77
PTCH1-203ENST00000375274 SLC25A42Q86VD7 318 aa10.27□□□□□ -0.77
PTCH1-203ENST00000375274 OR2C3Q8N628 320 aa10.27□□□□□ -0.77
PTCH1-203ENST00000375274 ZNF107Q9UII5 783 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-203ENST00000375274 CCDC187A0A096LP49 1063 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 TNFSF14O43557 240 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 HLA-DQB1P01920 261 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 ACAA2P42765 397 aaKnown RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 LIMK1P53667 647 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 OR5C1Q8NGR4 320 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 TECTBQ96PL2 329 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 SHARPINQ9H0F6 387 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 ZNF331Q9NQX6 463 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 CT45A8P0DMV1 189 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 CT45A9P0DMV2 189 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 EFNB2P52799 333 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 HABP2Q14520 560 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 RAB35Q15286 201 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 CT45A2Q5DJT8 189 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms