RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SPERTQ8NA61 448 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 PIGCQ92535 297 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 HES7Q9BYE0 225 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 ZNF700Q9H0M5 742 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 DEPPQ9NTK1 212 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 FLVCR1Q9Y5Y0 555 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 LOC102723996A0A087X1L8 192 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 GDF1P27539 372 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 MLF1P58340 268 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 RAC1P63000 192 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 PIGYQ3MUY2 71 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 TIPARPQ7Z3E1 657 aaKnown RBP14.89□□□□□ -0.03
RXRB-201ENST00000374680 RHBDD1Q8TEB9 315 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 SPTSSAQ969W0 71 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 WDR54Q9H977 334 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 NXT1Q9UKK6 140 aaKnown RBP14.89□□□□□ -0.03
RXRB-201ENST00000374680 R4GN57 208 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 RP1L1Q8IWN7 2480 aaPredicted RBP14.89□□□□□ -0.03
RXRB-201ENST00000374680 NECAB3Q96P71 396 aaPredicted RBP14.89□□□□□ -0.03
RXRB-201ENST00000374680 PCDHB10Q9UN67 800 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 PCDHGA1Q9Y5H4 931 aa14.89□□□□□ -0.03
RXRB-201ENST00000374680 IGKV1-27A0A075B6S5 117 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 TEX13DA0A0J9YY54 714 aaPredicted RBP14.88□□□□□ -0.03
RXRB-201ENST00000374680 ZNF850A8MQ14 1090 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 AGPAT2O15120 278 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 F12P00748 615 aaPredicted RBP14.88□□□□□ -0.03
RXRB-201ENST00000374680 ZNF585AQ6P3V2 769 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 GPR137CQ8N3F9 429 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 SEMA6DQ8NFY4 1073 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 OR10D3Q8NH80 312 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 TMEM54Q969K7 222 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 MYOZ1Q9NP98 299 aaPredicted RBP14.88□□□□□ -0.03
RXRB-201ENST00000374680 C12orf4Q9NQ89 552 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 ZNF107Q9UII5 783 aaPredicted RBP14.88□□□□□ -0.03
RXRB-201ENST00000374680 PADI1Q9ULC6 663 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 KCNMB1Q16558 191 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 OR5AP2Q8NGF4 316 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 CPNE2Q96FN4 548 aaPredicted RBP14.88□□□□□ -0.03
RXRB-201ENST00000374680 ARPC5LQ9BPX5 153 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 OR51B6Q9H340 312 aa14.88□□□□□ -0.03
RXRB-201ENST00000374680 TUBAL3A6NHL2 446 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 SCGNO76038 276 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 SFT2D2O95562 160 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 CNR1P21554 472 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 CALCRP30988 508 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 SRSF3P84103 164 aaKnown RBP14.87□□□□□ -0.03
RXRB-201ENST00000374680 LPCAT3Q6P1A2 487 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 CHST5Q9GZS9 411 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 SHARPINQ9H0F6 387 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 TECTAO75443 2155 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 HSPB6O14558 160 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 GEMIN2O14893 280 aaKnown RBP14.87□□□□□ -0.03
RXRB-201ENST00000374680 CELA3AP09093 270 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 SLC25A4P12235 298 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 CCL1P22362 96 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 PPIAP62937 165 aaKnown RBP14.87□□□□□ -0.03
RXRB-201ENST00000374680 AIMP2Q13155 320 aaKnown RBP14.87□□□□□ -0.03
RXRB-201ENST00000374680 PHLDA2Q53GA4 152 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 VASH2Q86V25 355 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 HAS2Q92819 552 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 PLA2G3Q9NZ20 509 aa14.87□□□□□ -0.03
RXRB-201ENST00000374680 KRBOX1C9JBD0 128 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 FBXO24O75426 580 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 MTRF1O75570 445 aaKnown RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 PRF1P14222 555 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 NOVA1P51513 510 aaKnown RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 MC2RQ01718 297 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 PAN3Q58A45 887 aaKnown RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 SLC16A14Q7RTX9 510 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 LRRC46Q96FV0 321 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 GPHA2Q96T91 129 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 OCSTAMPQ9BR26 566 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 LIME1Q9H400 295 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 TCFL5Q9UL49 500 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 LHX6Q9UPM6 363 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 NCKAP5O14513 1909 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 PRR14LQ5THK1 2151 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 CPT2P23786 658 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 THBS4P35443 961 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 FOXG1P55316 489 aaPredicted RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 CLDN15P56746 228 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 PSG4Q00888 419 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 ZFP36L1Q07352 338 aaKnown RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 ACER2Q5QJU3 275 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 TMEM88Q6PEY1 159 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 MOB3CQ70IA8 216 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 PPP1R32Q7Z5V6 425 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 ARRDC1Q8N5I2 433 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 M1APQ8TC57 530 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 SLC25A32Q9H2D1 315 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 FOXD3Q9UJU5 478 aaPredicted RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 LSM5Q9Y4Y9 91 aaKnown RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 A0A087WZY1 265 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 FAM166BA8MTA8 275 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 SLC33A1O00400 549 aaPredicted RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 NTN3O00634 580 aaPredicted RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 VAMP5O95183 116 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 RCC1P18754 421 aaPredicted RBP14.86□□□□□ -0.03
RXRB-201ENST00000374680 PTGER4P35408 488 aa14.86□□□□□ -0.03
RXRB-201ENST00000374680 ZNF92Q03936 586 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms