RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 SNIP1Q8TAD8 396 aaKnown RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 HPSE2Q8WWQ2 592 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ARHGAP5-AS1Q96IT6 56 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 RADILQ96JH8 1075 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 PLSCR4Q9NRQ2 329 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 FREM1Q5H8C1 2179 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 MBD3L4A6NDZ8 208 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 MBD3L3A6NE82 208 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 MBD3L5A6NJ08 208 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 AHRRA9YTQ3 701 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 FABP7O15540 132 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 CPT2P23786 658 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 KIR2DL2P43627 348 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 RBP2P50120 134 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 PDZK1IP1Q13113 114 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ACSF3Q4G176 576 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ZNF324BQ6AW86 544 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 NLRC3Q7RTR2 1065 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ARRDC1Q8N5I2 433 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 MBD3L2Q8NHZ7 208 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 DMRTB1Q96MA1 342 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 SELENOIQ9C0D9 397 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 GPR173Q9NS66 373 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 KCNN3Q9UGI6 736 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 IGHV3-9P01782 118 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 HLA-HP01893 362 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 IGHV1-2P23083 117 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 FBXW12Q6X9E4 464 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 GVQW1Q8N7I0 195 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 OR6K3Q8NGY3 331 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 NUDCD2Q8WVJ2 157 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 TNFAIP8L1Q8WVP5 186 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 DVL3Q92997 716 aaPredicted RBP10.83□□□□□ -0.68
PRPF4-202ENST00000374199 CYYR1Q96J86 154 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 CA10Q9NS85 328 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 MYEF2Q9P2K5 600 aaKnown RBP10.83□□□□□ -0.68
PRPF4-202ENST00000374199 VSIG4Q9Y279 399 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 DOCK7Q96N67 2140 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 DBX1A6NMT0 343 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 CREBL2O60519 120 aaPredicted RBP10.83□□□□□ -0.68
PRPF4-202ENST00000374199 RGS11O94810 467 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 CHATP28329 748 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 SLC22A6Q4U2R8 563 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 SEM1Q6ZVN7 128 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 ZNF101Q8IZC7 436 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 OR51T1Q8NGJ9 327 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 SEC22CQ9BRL7 303 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 LDAHQ9H6V9 325 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 IFT22Q9H7X7 185 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 CRIM1Q9NZV1 1036 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 AKAP13Q12802 2813 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 CELSR3Q9NYQ7 3312 aa10.83□□□□□ -0.68
PRPF4-202ENST00000374199 MEIS3P1A6NDR6 274 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 CRTAPO75718 401 aaPredicted RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 TNFSF13O75888 250 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 SNAPC5O75971 98 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 MPIG6BO95866 241 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 ZBTB25P24278 435 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 UBE2MP61081 183 aaKnown RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 RAB1AP62820 205 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 GABRA6Q16445 453 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 DEFB109BQ30KR1 87 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 CEACAM21Q3KPI0 293 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 ZNF660Q6AZW8 331 aaPredicted RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 IDO2Q6ZQW0 420 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 OR4S1Q8NGB4 309 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 ZNF431Q8TF32 576 aaPredicted RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 METTL9Q9H1A3 318 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 BANF2Q9H503 90 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 HEXA-AS1Q9H8Q6 139 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 ZMAT3Q9HA38 289 aaKnown RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 RHOFQ9HBH0 211 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 GPN1Q9HCN4 374 aaPredicted RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 RCC2Q9P258 522 aaKnown RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 IGKV3-15P01624 115 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 DTYMKP23919 212 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 MICBQ29980 383 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 MUC20Q8N307 709 aaPredicted RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 CSNK2A3Q8NEV1 391 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 TMEM185AQ8NFB2 350 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 OSGIN2Q9Y236 505 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 ZNF407Q9C0G0 2248 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 C1QTNF9BB2RNN3 333 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 DISC1C4P0D8 188 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 TPD52L2O43399 206 aaKnown RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 MTCP1P56278 107 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 SF3B4Q15427 424 aaKnown RBP eCLIP10.82□□□□□ -0.683e-6■■■■□ 24
PRPF4-202ENST00000374199 FAM76BQ5HYJ3 339 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 C6orf183Q5T699 404 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 BPIFB2Q8N4F0 458 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 RBMXL3Q8N7X1 1067 aaKnown RBP10.82□□□□□ -0.68
PRPF4-202ENST00000374199 BEST4Q8NFU0 473 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 CHST6Q9GZX3 395 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 PLSCR3Q9NRY6 295 aa10.82□□□□□ -0.68
PRPF4-202ENST00000374199 A0A096LPE4 126 aa10.81□□□□□ -0.68
PRPF4-202ENST00000374199 A0A1W2PPZ6 126 aa10.81□□□□□ -0.68
PRPF4-202ENST00000374199 OR2AT4A6NND4 320 aa10.81□□□□□ -0.68
PRPF4-202ENST00000374199 M0QYG6 137 aa10.81□□□□□ -0.68
PRPF4-202ENST00000374199 IGLV1-44P01699 117 aa10.81□□□□□ -0.68
PRPF4-202ENST00000374199 PDGFAP04085 211 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms