RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ADAT3Q96EY9 351 aaPredicted RBP11.58□□□□□ -0.56
SSR4-202ENST00000370085 OR51I2Q9H344 312 aa11.58□□□□□ -0.56
SSR4-202ENST00000370085 ZCCHC4Q9H5U6 513 aa11.58□□□□□ -0.56
SSR4-202ENST00000370085 PPP1R3EQ9H7J1 279 aa11.58□□□□□ -0.56
SSR4-202ENST00000370085 ZNF665Q9H7R5 613 aa11.58□□□□□ -0.56
SSR4-202ENST00000370085 ISYNA1Q9NPH2 558 aa11.58□□□□□ -0.56
SSR4-202ENST00000370085 DNAJB11Q9UBS4 358 aa11.58□□□□□ -0.56
SSR4-202ENST00000370085 MIOXQ9UGB7 285 aa11.58□□□□□ -0.56
SSR4-202ENST00000370085 TLN2Q9Y4G6 2542 aa11.58□□□□□ -0.56
SSR4-202ENST00000370085 ABCA1O95477 2261 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 ZANQ9Y493 2812 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 CSPG4Q6UVK1 2322 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 A0A096LNT2 108 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 PNMA8CA0A1B0GUJ8 204 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 PQLC2LA1A4F0 135 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 B4DSR2 109 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 J3QT63 122 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 LGALS8O00214 317 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 SULT1B1O43704 296 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 LALBAP00709 142 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 HSMCR30P0CW71 290 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 MUC1P15941 1255 aaPredicted RBP11.57□□□□□ -0.56
SSR4-202ENST00000370085 ATF1P18846 271 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 RAB3AP20336 220 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 PMELP40967 661 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 IRF3Q14653 427 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 ZMYND11Q15326 602 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 UBE2V2Q15819 145 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 Q499Y3 187 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 HAGHLQ6PII5 290 aaPredicted RBP11.57□□□□□ -0.56
SSR4-202ENST00000370085 CLEC9AQ6UXN8 241 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 ZNF826PQ6ZT77 177 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 WDR86Q86TI4 376 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 ZFP41Q8N8Y5 198 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 OR10AC1Q8NH08 325 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 TRMT10AQ8TBZ6 339 aaKnown RBP11.57□□□□□ -0.56
SSR4-202ENST00000370085 NPRL2Q8WTW4 380 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 LRRC42Q9Y546 428 aa11.57□□□□□ -0.56
SSR4-202ENST00000370085 OOEPA6NGQ2 149 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 SRRM5B3KS81 715 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 LMX1BO60663 402 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 ALX3O95076 343 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 HCKP08631 526 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 RPS2P15880 293 aaKnown RBP11.56□□□□□ -0.56
SSR4-202ENST00000370085 PCMT1P22061 227 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 AZGP1P25311 298 aaKnown RBP11.56□□□□□ -0.56
SSR4-202ENST00000370085 PSMA1P25786 263 aaKnown RBP11.56□□□□□ -0.56
SSR4-202ENST00000370085 SOX2P48431 317 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 MTCP1P56278 107 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 TRAM1Q15629 374 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 ZNF404Q494X3 552 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.56□□□□□ -0.561e-6■■□□□ 14.5
SSR4-202ENST00000370085 DCDC5Q6ZRR9 648 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 ZNF367Q7RTV3 350 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 GCSAMQ8N6F7 178 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 LINC01356Q8N9X3 169 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 OR13C9Q8NGT0 318 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 AQP3Q92482 292 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 SGCDQ92629 289 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 FCGR1BQ92637 280 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 C12orf43Q96C57 262 aaKnown RBP11.56□□□□□ -0.56
SSR4-202ENST00000370085 OPALINQ96PE5 141 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 OR5M11Q96RB7 305 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 PKIBQ9C010 78 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 DCAF16Q9NXF7 216 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 RASL12Q9NYN1 266 aa11.56□□□□□ -0.56
SSR4-202ENST00000370085 LSM2Q9Y333 95 aaKnown RBP11.56□□□□□ -0.56
SSR4-202ENST00000370085 SIRT4Q9Y6E7 314 aaPredicted RBP11.56□□□□□ -0.56
SSR4-202ENST00000370085 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 CD5LO43866 347 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 ZNF205O95201 554 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 TNFAIP8O95379 198 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 LHBP01229 141 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 IGHV2-5P01817 119 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 GLRA1P23415 457 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 IL24Q13007 206 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 MLLT11Q13015 90 aaPredicted RBP11.55□□□□□ -0.56
SSR4-202ENST00000370085 SMIM21Q3B7S5 101 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 KCTD21Q4G0X4 260 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 ESCO2Q56NI9 601 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 DMRTC1Q5HYR2 192 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 FAM166AQ6J272 317 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 FIP1L1Q6UN15 594 aaKnown RBP11.55□□□□□ -0.56
SSR4-202ENST00000370085 C11orf53Q8IXP5 236 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 MKXQ8IYA7 352 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 Q8IYB0 196 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 DEFB108BQ8NET1 73 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 OR8B3Q8NGG8 313 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 OR51F2Q8NH61 342 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 TMIGD2Q96BF3 282 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 PGLYRP3Q96LB9 341 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 OR8B2Q96RD0 313 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 MGLLQ99685 303 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 PATZ1Q9HBE1 687 aaKnown RBP11.55□□□□□ -0.56
SSR4-202ENST00000370085 TMEM165Q9HC07 324 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 LRCH1Q9Y2L9 728 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 YLPM1P49750 1951 aaKnown RBP11.55□□□□□ -0.56
SSR4-202ENST00000370085 HIVEP2P31629 2446 aa11.55□□□□□ -0.56
SSR4-202ENST00000370085 TEP1Q99973 2627 aaKnown RBP11.55□□□□□ -0.56
SSR4-202ENST00000370085 MTORP42345 2549 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms